Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06- 14] 2,614 sequences; 44,919,977 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1802 89.7 6e-13 >seq1802 Length=45256 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| || ||||| |||||||||||||| || || |||||| |||||| Sbjct 29136 GCAAAGTCGGTGTGCAGGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAGACCG 29195 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAAT 127611 ||||||||||| |||||||| | |||||| || Sbjct 29196 GGCATGAGACCACGCTTCTTGAGCCAGAAGAT 29227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613487153652240