Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06- 14] 2,614 sequences; 44,919,977 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq995 96.9 3e-14 >seq995 Length=74854 Score = 96.9 bits (106), Expect = 3e-14 Identities = 106/140 (76%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 ||||| || || || |||||| || | || |||||||||||||| |||||||| | || Sbjct 23483 TTAAG-GGCAAGGAGGGTCGTCTTCGTGGCAATTTGATGGGAAAGCGTGTCGACTTTTCG 23425 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 |||||||| || ||||| |||| |||| | |||| |||| ||||||||||||| Sbjct 23424 GCACGTACTGTCATTACCGGTGATGCCAACCTGTCTCTTGATGAGGTTGGTGTTCCTCGC 23365 Query 668969 ATTATTGCTAAAAATCTTAC 668988 | ||| || | || ||| || Sbjct 23364 AGTATCGCAAGAACTCTCAC 23345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780692684709484