Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1474 109 4e-19
>seq1474
Length=13610
Score = 109 bits (120), Expect = 4e-19
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || |||||||| || || || || ||||| |||| || || | | | || ||
Sbjct 6687 ACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 6746
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| |||||| || ||||| ||||||||||| || || || |||||||| || ||||| |||
Sbjct 6747 AGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGA 6806
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || ||| | || | ||| ||||| | || || || ||||||| || |||
Sbjct 6807 ATCTTCGACTTGACATTGTCGATAGTATCAGAAGACTCGACCTCGAGAGTGATGGTCTTG 6866
Query 101441 CCGGT 101445
|| ||
Sbjct 6867 CCAGT 6871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396265775313198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |