Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq719 345 8e-90
seq1802 93.3 8e-14
>seq719
Length=48969
Score = 345 bits (382), Expect = 8e-90
Identities = 1145/1757 (65%), Gaps = 84/1757 (5%)
Strand=Plus/Plus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | || ||| ||| |||| || || || ||||||||||| |||||
Sbjct 15744 ACGGTGAACTGAATAGGGGCAGAAGCTGCCTGCGTACGCAGGTAGTACATGCCCGTCTTG 15803
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668
|| || ||| ||||||| | |||||| |||| ||| |||| | || |
Sbjct 15804 AGACCAAGCTT---CCAGCCGGCGAAGTGCAT-GCTGGTGA---TCTTGCCC---ATTGT 15853
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
| |||| | | |||| | ||| |||||||| |||||| ||||| | |
Sbjct 15854 CGGGTCCTTCATGTGG---------ATGTTGAGGGACTGGGACTGGTCGATGAAGGCACC 15904
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| ||| || ||||| | | | | |||||||| |||||| || |||||| | |
Sbjct 15905 ACGGTCGGCAGCCATCTGGACAACCGTGCGCTGGGAGATCTCCCATACAGTCTTGTACAA 15964
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845
| |||| || | || | | |||||||||||| | ||| || | | ||| |
Sbjct 15965 AGCCTTGACCTCAGCGGGAATGTTGGGGATGTTCTGAATAGAACCGTTCTCGGCGATGAT 16024
Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905
| | | |||| | ||| ||| |||||| || | || ||| | ||
Sbjct 16025 ACGGTTCTT---CATGGCATCGGACCACAGGCCCATGTCGACGAGATCCTTCAGCAACCA 16081
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
|||||||| | |||||| || || | || || | | |||||| | ||| || |||||
Sbjct 16082 GGGGTTGACAACCTGGAACTCGCCGGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTA 16141
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
|||||||| || ||||||||| |||| ||||| | |||| ||| || |||||||| ||
Sbjct 16142 GGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGCGAAGTGGAGGCAGTAGGCATGGGGGC 16201
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085
|| || | |||||| | ||| |||||||| ||| | | || |||||||
Sbjct 16202 AACGAGCAAACTGTTGCGCACACCGTGCTCCTTGATCTGCTCCTTCAGAGAATCCCAGTC 16261
Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145
||| |||| | ||| || ||||||||||| |||| | ||| || |
Sbjct 16262 CCAAAGATCAGAGGG---------CTTGACATTCCACATGTCGTACTGAAGGATACCCTG 16312
Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205
| | ||| ||||| ||| | |||||||| ||| | |||||||||||||| |||
Sbjct 16313 GGAGATAGGGGAGCCCTCGTACGTGGAGTAGGTGCCCTCCTCCTTGGCCAGCTGAACGGA 16372
Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265
| ||| ||||||| ||||||||| ||||| |||| | ||||||| | ||||||
Sbjct 16373 CATGGTCAGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGGGCCTC 16432
Query 213266 TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325
|| ||| ||| ||||| | | |||| ||||||| || |||||||| || |
Sbjct 16433 AGGAGACTCGAAAGGCATGCGAAGGGCGAGGAAAGCATCAGCAAGACCCTGGACACCAAG 16492
Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGC 213384
|| ||||| | ||| | || ||| ||| |||| ||| | |||||| ||||
Sbjct 16493 ACCAATGGGGCGGTGACGCATGTTGCTATTGCGAGC-CTCGGGAACGGGGTAGTGGTTGA 16551
Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444
|| ||||||||||| | |||||| | || | ||||| | | || | |
Sbjct 16552 CATCAATGATCTTGTTCAAGTTGCGAACAACGACCTGAGTGACCTCGTGAAGCTTC---- 16607
Query 213445 GATTGAACACGTAGCCCCC------GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCA 213498
| ||| | ||| | || || | || || |||||||| | | ||||
Sbjct 16608 --TGGAAGTCATAGACACCATCGTTGTAGTCAACGAAGGTGGGCAGGGCAAGGGAAGCCA 16665
Query 213499 GGTTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557
|||||| || || ||||| | | ||| | |||||| |||||||| ||||| ||||||
Sbjct 16666 AGTTGCAGACAGCGACCTCATCGGGAG-CGCAGTACTCAATGATCTCAGTGCAGAGGTTG 16724
Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAG 213617
|| |||||||| |||||||||| ||||| ||| |||||| | ||||||||||
Sbjct 16725 GAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCCTTGTAG 16784
Query 213618 AGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACC 213675
|||||| ||||| || ||||| ||| | | | || | |||| ||| || | |
Sbjct 16785 AGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCAAGGA--TGGCATACCAAAGCTTCT 16842
Query 213676 TGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCG 213734
|||||||| | || | | | | | | || ||||||| ||||| | |
Sbjct 16843 GGGCCTTGA----TAGTCTTGCGACCCTTGCCCTCGCGTTCGTACTTCTCGTACAAGGCC 16898
Query 213735 TTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCT 213793
| ||| || | ||| || | | | ||| || || || ||| ||||||||| |
Sbjct 16899 TCGAACTCTTCGCCGTAGCAGTCAG-CCAAGCCAGGGCACTCATTGGGGCACATGAGGGT 16957
Query 213794 CCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852
|||||| || || |||| |||||||| ||||||||| || |||| ||| || ||| ||
Sbjct 16958 CCAGTCGGCGTTCTTCTC-GACTCTCTTCATGAACAGATCGGGGATCCAGAGAGCGAGGA 17016
Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912
| || || | | | ||| ||| || ||| ||||||| || | || || |
Sbjct 17017 AAAGATCGCGAGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCCATGAACTCGA 17076
Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGC 213969
||| || |||||||| ||||| | ||| ||||| ||||| || | || | ||||| |
Sbjct 17077 AGACATCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAGGCACCAGGACGCTTGTTGCCAC 17136
Query 213970 CCTGGTCCACCAGCCTGGCCACCA----TGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025
||||||| | | | || | || ||||||||| || || | ||| | | |||
Sbjct 17137 CCTGGTCGA----CGTAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGAATGACACCG 17192
Query 214026 TTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATG 214082
|| || ||| |||||||| || || || || ||||| | || | | | || | |
Sbjct 17193 TTCGA-TGTACCGTTGGTGCCGGCAATGTAGGAGCCAGTAGCACGGATACGGTGAGCGTT 17251
Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142
|||| || |||||||| || ||||||||||||||||||| | | | || ||
Sbjct 17252 GAGA--CCAATGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAA 17309
Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202
|| || | || ||| || | | || | | |||||| || |||||| |
Sbjct 17310 ATACCCTCAATAGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGA 17369
Query 214203 GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGC 214262
| | |||| |||||| || |||||| ||| ||| | | |||||| | || | |||
Sbjct 17370 GGGGTACCAGCGTTGAAGAGTGTGGGGGAGGCGTGGGTGAAGAACTTGCTGGACATGAGG 17429
Query 214263 CTGTAGGTCTCCAGGAC 214279
|||||||||| | |||
Sbjct 17430 TTGTAGGTCTCGATGAC 17446
>seq1802
Length=45256
Score = 93.3 bits (102), Expect = 8e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
||||| || | || | |||||||||||||| ||||| || | | ||||||||||||
Sbjct 28650 TGGTAATCGGCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCC 28709
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTC-AGGCCCATCTGTTCCAGCAG 47958
|||||| ||||||||||| | || || | || |||| ||| | |||| ||
Sbjct 28710 ATGAAGTCGAAGGGGTTGGAAGACTTGTAGA-CCTTGTCGTTGCCAAGAGCGACCAGAAG 28768
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
| | || || ||| |||||||||| | ||| | | || ||||||||| | || |
Sbjct 28769 GCGGTCAGCAACGAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCGAGAAGAGC 28828
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTC 48066
||||| ||||| || || ||||| | ||| |||| ||||| ||
Sbjct 28829 GCAGGGCAGAGCCTCAGTCAGGAACTCTTGCTCAATCTTGACGGCATC 28876
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189
|||||||||||| |||||| ||| || || ||| ||||||| ||||||||||| ||
Sbjct 29132 GCAGGCAAAGTCGGTGTGCAGGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAG 29191
Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAG 48236
||| ||||||| || | || ||||||||||| || | || ||||
Sbjct 29192 ACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAG 29238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931502362165760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |