Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06- 14] 2,614 sequences; 44,919,977 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq719 86.0 2e-11 >seq719 Length=48969 Score = 86.0 bits (94), Expect = 2e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 160047 AGCCAAGTTGCAGGAGGCAAACTCATTCTTATCGCTGTATTCAATGATTTCGGTGCAGAG 160106 ||||||||||||| || | ||||| | ||| ||| |||||||| || |||||||| Sbjct 16661 AGCCAAGTTGCAGACAGCGACCTCATCGGGAGCGCAGTACTCAATGATCTCAGTGCAGAG 16720 Query 160107 GTTGCTTCTCTCGATGATTCCGAGGTTCTTTTGGTTGCTTTTGAAGTTGGCCGCGTC 160163 |||| || |||| |||| |||||||| |||||||| ||| |||||| || || Sbjct 16721 GTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATC 16777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951909024717392