Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq1593 152 6e-32
>seq1593
Length=35623
Score = 152 bits (168), Expect = 6e-32
Identities = 338/513 (66%), Gaps = 47/513 (9%)
Strand=Plus/Plus
Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985
|||||||||| ||||||||||||||| |||| | |||| | | |||||
Sbjct 956 TCCACGTGGTCCGCGTAGACGTGCGCGTCGCCCATGACGTGCGTGAGGCTTCCCGGTACC 1015
Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045
|| || | | | || | ||||| || || |||| ||||||||| |||||||||||
Sbjct 1016 AGATCGCACGCCCGCGCAATCATGTGTGTCAGGAGCGCGTAGCTGGCAATGTTGAAGGGT 1075
Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCT--CCC------ 147097
|| || || |||||||| | |||| ||||||||||||||| ||| | |||
Sbjct 1076 ACGCCGAGTCCCATGTCGCAGGACCGCTGGTACAGCTGGCAATGGAGGTGGCCCTTTGGC 1135
Query 147098 -----------------CGTCG-GCC-------------------ACGTAAAACTG-GCA 147119
||| | ||| ||||||||||| |||
Sbjct 1136 TTCTCCTCATTTGCGAGCGTTGCGCCGCGGGCTCGCGGGTACGAGACGTAAAACTGCGCA 1195
Query 147120 CAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGAC 147179
| |||||||||||||| |||||||| ||||||||| || ||||| || ||
Sbjct 1196 AAC-ATGTGGCACGGCGGGAGCGCCATCTTCTTCAGGTCCGCTGGATTCCACGCGCTGAG 1254
Query 147180 CACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTC 147239
| | || | | | |||||| |||| | || | ||| ||| ||| |||||
Sbjct 1255 GAGGATGCGGCGGTCGTAAGGGTTCGTCTTGAGCTTGTGGATGACCTCGGCCAGTTGGTC 1314
Query 147240 CACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCA 147299
|||||||||||| ||| | ||| | |||| |||||| ||| |||||||| | |||
Sbjct 1315 GACGCCCTGGCCCGTGTAATCCGTCTTGGAGTCGACGTACTCGGCGCCAAAGTGGCGCCA 1374
Query 147300 CTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTT 147359
|||||||||||||| || || ||||||||| | | ||| |||| ||| | | |
Sbjct 1375 TTGGAAGCCGTACACGGGGCCGAGGTCGCCGACTTCGCGGTGTGAGAGGCCGACGCTGTC 1434
Query 147360 GAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392
||| |||||| | || |||| | ||||||||||
Sbjct 1435 GAGGAACTCGCGCGATCCGTTGCCGTCCCAGAT 1467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583468934529600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |