Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq719 89.7 2e-12
seq1802 86.0 2e-11
>seq719
Length=48969
Score = 89.7 bits (98), Expect = 2e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037
|| || ||| | ||||| ||||||||| |||||||||||||| || || ||| |||
Sbjct 17185 ATTCCCATGCTTCGTGTCTTCAACAACACTGCTCGCTACGTCGACCAGGGTGGCAACAAG 17126
Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
|| || || || ||| |||| ||||| ||||| |||||||||||
Sbjct 17125 CGTCCTGGTGCCTTCGCCATTTACCTTGAGCCCTGGCACGCCGA 17082
>seq1802
Length=45256
Score = 86.0 bits (94), Expect = 2e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 443755 GCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGT 443814
||||| ||||||||||||||| | || |||||||| || |||| ||||||||||||
Sbjct 29239 GCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCC 29180
Query 443815 AACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864
||||| || ||| || || ||||| |||| |||||| ||||| ||
Sbjct 29179 AACGAGCTCATCTCCCGTGATGAGGGCCTGCACACCGACTTTGCCTGCCT 29130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588282803649230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |