Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06- 14] 2,614 sequences; 44,919,977 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq719 89.7 2e-12 seq1802 86.0 2e-11 >seq719 Length=48969 Score = 89.7 bits (98), Expect = 2e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| | ||||| ||||||||| |||||||||||||| || || ||| ||| Sbjct 17185 ATTCCCATGCTTCGTGTCTTCAACAACACTGCTCGCTACGTCGACCAGGGTGGCAACAAG 17126 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 || || || || ||| |||| ||||| ||||| ||||||||||| Sbjct 17125 CGTCCTGGTGCCTTCGCCATTTACCTTGAGCCCTGGCACGCCGA 17082 >seq1802 Length=45256 Score = 86.0 bits (94), Expect = 2e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 443755 GCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGT 443814 ||||| ||||||||||||||| | || |||||||| || |||| |||||||||||| Sbjct 29239 GCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCC 29180 Query 443815 AACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864 ||||| || ||| || || ||||| |||| |||||| ||||| || Sbjct 29179 AACGAGCTCATCTCCCGTGATGAGGGCCTGCACACCGACTTTGCCTGCCT 29130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588282803649230