Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq1593 107 2e-18
>seq1593
Length=35623
Score = 107 bits (118), Expect = 2e-18
Identities = 143/196 (73%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 29620 TCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGC 29679
||| ||||| | ||| || || | | | |||| ||||||||||| ||||||||| ||
Sbjct 922 TCTCGGCTCGCGCTCTAGTTGCACCTTGAGCGCGTCCACGTGGTCCGCGTAGACGTGCGC 981
Query 29680 ATCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGT 29738
|| |||| | ||| | | || ||||||| | || || | | || |||||||
Sbjct 982 GTCGCCCATGACGTGCGTGAGGCT-TCCCGGTACCAGATCGCACGCCCGCGCAATCATGT 1040
Query 29739 ACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACC 29798
|| ||||| | ||||||||| ||||| ||||| || ||||| |||||||| | ||||
Sbjct 1041 GTGTCAGGAGCGCGTAGCTGGCAATGTTGAAGGGTACGCCGAGTCCCATGTCGCAGGACC 1100
Query 29799 TCTGGTAGAGCTGGCA 29814
|||||| ||||||||
Sbjct 1101 GCTGGTACAGCTGGCA 1116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406150260402004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |