Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017-
01-05] 558 sequences; 52,387,045 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq449 87.8 2e-12
>seq449
Length=641369
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/209 (69%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194
|| ||||| ||| ||| ||||||||||| | | || | ||||| || || || ||
Sbjct 272104 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATAAGCTCGTTAGAGAATGTCAGA 272163
Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254
|||||||| || || ||||| || ||||| || ||||| || || | || ||||||
Sbjct 272164 CCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAAGCGAAGGCACCGCTAAAGAAG 272223
Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCT---GTCATGT 24311
|| || || || || |||||||||| || | | || | || | |||
Sbjct 272224 ATACCCTCAACGGCAGCAAAGGCAACTAGACGCTGGGCAAAGGTGGACTTCTGGTCGGAG 272283
Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTT 24340
|||||||| ||||||| |||||||||||
Sbjct 272284 ATCCACTTGAGAGCCCAGTCGGCCTTCTT 272312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593717458791840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |