Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017-
01-05] 558 sequences; 52,387,045 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq289 167 3e-36
>seq289
Length=429572
Score = 167 bits (184), Expect = 3e-36
Identities = 426/649 (66%), Gaps = 62/649 (10%)
Strand=Plus/Minus
Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730
|||||| | ||| || | ||||| |||| | ||| || ||||| || |||| ||||||
Sbjct 230219 CAGCTGCACCTTGAGCGCGTCCACATGGTCCACGTAAACATGCGCATCTCCCATGACGTG 230160
Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAG-GTGGGCGACCATGTAGGTCAGCAGGGAGT 145789
| | | |||||| ||||| | | || | | || | ||||| || ||||| | ||
Sbjct 230159 CGTCAGGCTGCCGGGCACGAGGTC-GCAAGCGCGTGCAATCATGTGCGTGAGCAGCGCGT 230101
Query 145790 AGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGC 145849
|||| || |||||||||||||| || || |||||||| | ||||| || || | ||||
Sbjct 230100 AGCTCGCAATGTTGAAGGGCACGCCGAGTCCCATGTCGCAGGAGCGTTGATATAATTGGC 230041
Query 145850 A----------------GG----AGAGC---------TCCCCGCCCGCC----------- 145869
| || ||| | |||| || | ||
Sbjct 230040 AATGCAGGTGACCCTTGGGCTTCAGATCCTCTCCATCTCCCGGCGCACCGCGAGGTCGCG 229981
Query 145870 --------ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGG 145920
||||||||||| ||| | | ||||||||||||||||||||| ||
Sbjct 229980 GGTATGAGACGTAGAACTGCGCAAAC-ATGTGGCAGGGCGGCAGGGCCATCTTCTTAAGA 229922
Query 145921 TCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATC 145977
|| || |||||||| ||| |||||| || | | || ||| ||||| |||||| |
Sbjct 229921 TCGGCGGGGTTCCACGCGCTGAGGAGGA---TGCGGCGGTCGTAAGGGTTTGTCTTGAGC 229865
Query 145978 TCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCC 146037
| || | || ||| ||||| |||||||| ||| || ||||||||||||||
Sbjct 229864 TTGTGGATGACCTCGGCGAGTTGGTCGACGCCCTGGCCCGTATAGTCTGTCTTGGAGTCG 229805
Query 146038 ACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGC 146097
|||||| |||| || || || | ||| ||||| ||||| || || || ||||| ||
Sbjct 229804 ACGTACTCGGCGCCAAAATGTCGCCATTGGAAGCCGTACACAGGACCGAGGTCGCCAACT 229745
Query 146098 TCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATC 146157
|| | ||| || ||| | | | ||||||| || || || ||||| |||||||||||
Sbjct 229744 TCGCGGTGGGAGAGGCCGACGCTGTCGAGGAACTCGCGCGAGCCGTTTCCGTCCCAGATC 229685
Query 146158 TTGACGCC--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCA 146215
|||||||| | |||| || | | |||| |||| ||| || ||||||||| |
Sbjct 229684 TTGACGCCTGCTTCGCTCAGTG--CGAGGGAGGACGTGTTTCCCTCGACGAACCAGAGAA 229627
Query 146216 GCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264
|||| ||| ||| | | |||||| | || || || || |||||
Sbjct 229626 GCTCGGCGATGACGGCGCGGAGGAAGACGCGTTTCGTTGTGAGAAGGGG 229578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590072684214320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |