Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017-
01-05] 558 sequences; 52,387,045 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq516 367 3e-96
>seq516
Length=1641395
Score = 367 bits (406), Expect = 3e-96
Identities = 1070/1633 (66%), Gaps = 40/1633 (2%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| |||||| | || ||| ||| ||| || || || | | | || ||||||||
Sbjct 1416937 TTCACCCACGCCTCTCCCACACTGTTCAACGCCGGTACCCCCCAGGCTCAACTGTCTTCT 1416878
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| ||| | | |||||||| || |||||||| || |||| ||||| || ||||
Sbjct 1416877 TGCTTCCTTGTCGACATGAAGGAGGACTCCATCGAAGGCATCTACGACACTCTCAAGACG 1416818
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | || || |||| || ||||| ||||| | | || ||||| |||| ||
Sbjct 1416817 TGTGCCATGATCTCAAAGATGGCTGGCGGCATTGGCATGAACG-TCCACCGCATTCGCGC 1416759
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|| | || |||| |||||| || ||| || || | | ||||||||||
Sbjct 1416758 TACTGGCTCGT-ACATCGCCGGCACCAATGGCACCTCCAACGGTGTCATCCCCATGCTTC 1416700
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
| || || |||| || || | ||||||||||||||||| |||||| || || |
Sbjct 1416699 GAGTTTTCAACAACACCGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGCGCCT 1416640
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
| || || ||||||||||| || |||||| |||| ||||| | || ||||| || |
Sbjct 1416639 TCGCCATCTATCTCGAGCCCTGGCACGCCGATGTTTTCGAGTTCTTGGATCTCCGCAAGA 1416580
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|| || |||||||| | ||||| || ||||| ||| ||| || ||| || | || |
Sbjct 1416579 ACCACGGCAAAGAGGAGGTTCGTGCCCGCGATCTCTTCCTTGCCCTCTGGATTCCCGATC 1416520
Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGAAT------TGGTCACTCTTTTGCCCACACG 364018
|| |||||| | ||||| |||||| ||| | ||| | || || |||
Sbjct 1416519 TCTTCATGAAGAGGGTGGA------AAAGAATGGCGAGTGGACGCTCATGTGTCCCAACG 1416466
Query 364019 AATGTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTA 364076
| || || || ||| |||| || ||| || || || | || || | || || |||||
Sbjct 1416465 AGTGCCCCGGCCTTGCCGACTGCTAT--GGCGAAGAGTTTGAGGCCTTGTATGAGAAGTA 1416408
Query 364077 TGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCAT 364136
|| ||||| |||| || ||||| | || || ||||| |||| |||||| |
Sbjct 1416407 CGAGCGCGAGGGCAAGGGCCGCAAGACCCTAAAGGCTCAAAAGCTCTGGTATGCCATTCT 1416348
Query 364137 GGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAA 364196
|| | |||| ||||| || | || | ||| | || || ||| |||||||||
Sbjct 1416347 CGAGGCACAGACCGAGACTGGTAACCCGTTCATGCTTTATAAGGATCACGCCAACCGCAA 1416288
Query 364197 GTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGA 364256
| ||||||| || |||| ||||| || | | ||| || || || ||||| |||||
Sbjct 1416287 GAGCAACCAGAAGAACCTCGGTACCATCCGCAATTCCAATCTGTGCACTGAGATCATTGA 1416228
Query 364257 ATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTT 364316
||| ||| || |||||| || || || ||| | || ||| |||| || || || ||
Sbjct 1416227 GTACTGCGCGCCTGACGAGGTCGCTGTTTGCAACTTGGCCTCGCTCGCCCTGCCTGCATT 1416168
Query 364317 TGT------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGC 364370
||| || || || | | ||| |||| | || |||| ||| | ||
Sbjct 1416167 TGTCGACTACAACGAGAGTGCATACGACTTCCAGAAGCTCCATGAGACCACCCAGGTTGT 1416108
Query 364371 TACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG--- 364426
| |||| || ||| | | || || || | || || |||| || || ||
Sbjct 1416107 TGTACGCAACCTGAACAGGATCATTGATGTCAACCACTACCCTGTTCCGGAGGCTCGTAA 1416048
Query 364427 -AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTT 364485
||| || |||||||| ||||| || || |||||||| || || || ||||| | |
Sbjct 1416047 CAGC-----AACATGCGTCACCGCCCTATCGGCCTTGGTGTCCAAGGTCTTGCTGATGCT 1415993
Query 364486 TTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATC 364545
|| || || || | || || || ||||| ||||| | ||| ||||| |||||
Sbjct 1415992 TTCTTGGCTCTGCGTCTGCCCTTCGAGTCCCCTGAGGCTCGCGATCTTAATAAAAAGATC 1415933
Query 364546 TTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGG 364604
|| || || || || || || |||| ||| ||| | |||| || ||||
Sbjct 1415932 TTCGAGACCATCTACCACGCTGCTCTGACCATGTCG-GTGCAGCTGGCCAAGGAGGAGGG 1415874
Query 364605 AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATG 364664
| ||| |||| ||||| || ||| | || |||| | |||||| ||| | ||
Sbjct 1415873 TACCTACGAGTCTTACGAGGGTTCGCCTATCTCCAAGGGCGAGCTCCAGTATGACATGTG 1415814
Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGC 364723
| || | ||| || | | |||| ||||||| |||| | | | | | | | |||
Sbjct 1415813 GGGAGTGAAGCCGTCCGACTTATGGGACTGGGACTCGCTGAAGGAGC-AGATCACGCAGC 1415755
Query 364724 ATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCC 364783
| ||| |||||| || || || |||||||| || || || | |||||||
Sbjct 1415754 ACGGTGTACGCAACAGTCTGCTTGTTGCCCCCATGCCTACTGCCAGCACCTCGCAGATCC 1415695
Query 364784 TCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTT 364843
| || |||| |||||||||||||||| || ||| | || ||||| || ||
Sbjct 1415694 TGGGCTACAATGAGTGCTTCGAACCGTACACCTCCAACATCTACCAGCGCCGTGTACTGG 1415635
Query 364844 CCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGT 364903
|||| || || | ||| || || | || |||||||||| ||| || ||||
Sbjct 1415634 CCGGCGAGTTCCAGGTCGTCAACCCCTGGCTTCTCAAGGATCTGGTCGAGATGGGCCTGT 1415575
Query 364904 GGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAG 364963
|| ||| |||||||||| ||||||||||| || |||||||| |||||||| ||
Sbjct 1415574 GGTCTGATGCCATGAAGAACCGTATCATCGCCGAGAACGGTTCTGTTCAGAACATCCCGA 1415515
Query 364964 GATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC 365023
| || | || ||||| || | ||||| ||||| |||||||| || ||| ||
Sbjct 1415514 ACATCCCGGCCGAGGTGAAGGCTCTGTACAAGACCGTCTGGGAAATCTCTCAGCGGACCG 1415455
Query 365024 TCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTAT 365083
| || | ||||| || || || ||||| || ||| ||| ||||| | ||| |
Sbjct 1415454 TTGTTCAGATGGCCGCAGACCGTGGTGCCTTCATCGACCAGTCGCAGTCCCTCAACATTC 1415395
Query 365084 TCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCG 365143
||||| | || ||| | |||| | || |||||| ||| ||| ||||| ||
Sbjct 1415394 ACATGAAGGACCCGACCATGGGCAAGATCACCAGCATGCACTTCGCCGGTTGGAAGCTCG 1415335
Query 365144 GTCTTAAGACAGG 365156
| || ||||||||
Sbjct 1415334 GCCTGAAGACAGG 1415322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303344281836356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |