Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017- 01-05] 558 sequences; 52,387,045 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq380 102 7e-17 >seq380 Length=739652 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068 ||| |||| || || | || || |||| |||||| || |||||||||||| | ||| Sbjct 522903 ACAGTAACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCCGACACCATCGACAATGTC 522962 Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128 || ||||| ||||| || ||||| |||||||| || ||| | ||||||| || Sbjct 522963 AAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGCCTGATTTTCGCT 523022 Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACA 24188 |||||||| ||||| |||| | | | || ||| || |||||||| || || || || Sbjct 523023 GGCAAGCAGCTCGAGGATGGCCGTACGCTCTCCGACTACAACATTCAGAAGGAGTCCACT 523082 Query 24189 ATTCATTTAGT 24199 |||| || || Sbjct 523083 CTTCACTTGGT 523093 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24003 GTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAG 24062 || || ||| | || || || | |||||| | || || ||| | || |||||||| Sbjct 523177 GTCAAGACACTCACCGGCAAGACCATTACCCTTGAGGTAGAGTCATCTGATACCATCGAC 523236 Query 24063 CAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATT 24122 | ||||| ||||| ||||| || ||||| || ||||| || ||| | |||||| Sbjct 523237 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGGCTGATT 523296 Query 24123 TACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAA 24182 | || |||||||||||||| |||| | | | |||||| |||||||| || || Sbjct 523297 TTCGCTGGCAAGCAACTCGAGGATGGTCGTACTTTGTCCGATTACAACATTCAGAAGGAG 523356 Query 24183 TCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| | || || ||||| | ||| | ||||| Sbjct 523357 TCTACGCTCCACTTGGTGTTGCGTTTGCGCGGAGG 523391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933076166490