Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017-
01-05] 558 sequences; 52,387,045 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq380 116 3e-21
>seq380
Length=739652
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||||||||| ||||| || || || ||||| |||| | ||| | |||| ||||||||
Sbjct 523596 ATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCCAATTG 523537
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || || || ||||| ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct 523536 CTTTCCGGCGAAGATCAATCGCTGCTGGTCGGGGGGAATACCCTCCTTATCCTGAATCTT 523477
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| | || | || || || | || || ||||| |||| || ||||| ||
Sbjct 523476 GGACTTGACATTGTCGATCGTATCTGAAGACTCAACCTCAAGGGTGATTGTCTTGCCAGT 523417
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| || || || || ||||||||
Sbjct 523416 GAGGGTCTTGACGAAAATCTGCAT 523393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396275705059206
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |