Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017- 01-05] 558 sequences; 52,387,045 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq380 116 3e-21 >seq380 Length=739652 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| ||||| || || || ||||| |||| | ||| | |||| |||||||| Sbjct 523596 ATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCCAATTG 523537 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || ||||| ||||| || ||||| ||||| || || ||||| ||||| || Sbjct 523536 CTTTCCGGCGAAGATCAATCGCTGCTGGTCGGGGGGAATACCCTCCTTATCCTGAATCTT 523477 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | || || || | || || ||||| |||| || ||||| || Sbjct 523476 GGACTTGACATTGTCGATCGTATCTGAAGACTCAACCTCAAGGGTGATTGTCTTGCCAGT 523417 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 523416 GAGGGTCTTGACGAAAATCTGCAT 523393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396275705059206