Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017-
01-05] 558 sequences; 52,387,045 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq516 242 7e-59
seq449 129 1e-24
>seq516
Length=1641395
Score = 242 bits (268), Expect = 7e-59
Identities = 1193/1875 (64%), Gaps = 74/1875 (4%)
Strand=Plus/Plus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | || ||||||| |||| || || || ||||||||||| |||||
Sbjct 1415271 ACAGTGAACTGGATAGGGGCAGCAGCCGCCTGAGTTCGCAGGTAGTACATGCCTGTCTTC 1415330
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668
||||| ||| ||| ||| | |||||| |||| ||| |||| | || |
Sbjct 1415331 AGGCCGAGCTT---CCAACCGGCGAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGT 1415380
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
| |||| | || || || | ||| |||||||| |||||| ||||| | |
Sbjct 1415381 CGGGTCCT--TCATG-------TGAATGTTGAGGGACTGCGACTGGTCGATGAAGGCACC 1415431
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| ||| |||||||| | | | | ||| |||| ||||| ||||||||| | |
Sbjct 1415432 ACGGTCTGCGGCCATCTGAACAACGGTCCGCTGAGAGATTTCCCAGACGGTCTTGTACAG 1415491
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845
| || | || | |||| | ||||||||||| ||||| || | | ||| |
Sbjct 1415492 AGCCTTCACCTCGGCCGGGATGTTCGGGATGTTCTGAACAGAACCGTTCTCGGCGATGAT 1415551
Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905
| | | |||| | || ||| |||||| | |||| ||||| ||
Sbjct 1415552 ACGGTTCTT---CATGGCATCAGACCACAGGCCCATCTCGACCAGATCCTTGAGAAGCCA 1415608
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
|||||||| | |||||| || || | || || | | |||||| | ||| || |||||
Sbjct 1415609 GGGGTTGACGACCTGGAACTCGCCGGCCAGTACACGGCGCTGGTAGATGTTGGAGGTGTA 1415668
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
|| |||| || ||| |||| ||||| ||||| | |||||||| || |||||||| ||
Sbjct 1415669 CGGTTCGAAGCACTCATTGTAGCCCAGGATCTGCGAGGTGCTGGCAGTAGGCATGGGGGC 1415728
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085
|| || |||||||| | || ||||||| ||| | | ||| |||||||
Sbjct 1415729 AACAAGCAGACTGTTGCGTACACCGTGCTGCGTGATCTGCTCCTTCAGCGAGTCCCAGTC 1415788
Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145
|||| | | ||| | |||||| |||||||||| |||| | ||| ||
Sbjct 1415789 CCATAAGTCGGACGG---------CTTCACTCCCCACATGTCATACTGGAGCTCGCCCTT 1415839
Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG-G 213204
| | || |||| |||||| ||||| || | |||||||||||||| ||| |
Sbjct 1415840 GGAGATAGGCGAACCCTCGTAAGACTCGTAGGTACCCTCCTCCTTGGCCAGCT-GCACCG 1415898
Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264
|| ||| ||||||| ||||||||| || || |||| | || || | ||||
Sbjct 1415899 ACATGGTCAGAGCAGCGTGGTAGATGGTCTCGAAGATCTTTTTATTAAGATCGCGAGCCT 1415958
Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324
| |||||| |||||||| || ||| ||||||| || || ||||| || |
Sbjct 1415959 CAGGGGACTCGAAGGGCAGACGCAGAGCCAAGAAAGCATCAGCAAGACCTTGGACACCAA 1416018
Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383
|||||| || | ||| | || ||| || |||| |||| | ||||| ||||
Sbjct 1416019 GGCCGATAGGGCGGTGACGCATGTTGCTGTTACGAGC-CTCCGGAACAGGGTAGTGGTTG 1416077
Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGA---CATGG-GC--CAGG 213437
|| |||||| |||| |||||||| | || | |||| ||||| || | ||
Sbjct 1416078 ACATCAATGATCCTGTTCAGGTTGCGTACAACAACCTGGGTGGTCTCATGGAGCTTCTGG 1416137
Query 213438 TACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCC 213497
| |||| || || | | || | ||||| |||||||||||| ||||
Sbjct 1416138 AAGTCGTA--TGCACTCT----CGTTGTAGTCGACAAATGCAGGCAGGGCGAGCGAGGCC 1416191
Query 213498 AGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557
| ||||||||| || ||||| | || | |||||| |||||||| |||||||| |||
Sbjct 1416192 AAGTTGCAAACAGCGACCTCGTCAGGCGCGCAGTACTCAATGATCTCAGTGCACAGATTG 1416251
Query 213558 CTGCAT--CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGT 213615
| || |||||||| || ||||||| ||||| ||| |||||| |||||| |
Sbjct 1416252 --GAATTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTTAT 1416309
Query 213616 AGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTA 213673
| |||||| | ||| || ||||| ||| | | | || | |||| |||||| |
Sbjct 1416310 AAAGCATGAACGGGTTACCAGTCTCGGTCTGTGCCTCGAGAA--TGGCATACCAGAGCTT 1416367
Query 213674 CCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCT 213732
||||| | | || | || | | | | || |||||||| || || |
Sbjct 1416368 TTGAGCCTTTA----GGGTCTTGCGGCCCTTGCCCTCGCGCTCGTACTTCTCATACAAGG 1416423
Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGC 213792
| | || || | ||| || | | || || || || ||||||||||||
Sbjct 1416424 CCTCAAACTCTTCGCCATAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGACACATGAGCG 1416483
Query 213793 TCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852
|||| || || | | | || |||| |||||| || || || | ||| || || ||
Sbjct 1416484 TCCACTCGCCATTCTTTTCCACCCTCTTCATGAAGAGATCGGGAATCCAGAGGGCAAGGA 1416543
Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912
| || || | || | ||| || || ||| ||||| ||||| | || || |
Sbjct 1416544 AGAGATCGCGGGCACGAACCTCCTCTTTGCCGTGGTTCTTGCGGAGATCCAAGAACTCGA 1416603
Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGC 213969
| | || |||||||| ||||| | |||||||| |||||||| | || | ||||| |
Sbjct 1416604 AAACATCGGCGTGCCAGGGCTCGAGATAGATGGCGAAGGCGCCGGGGCGCTTGTTGCCAC 1416663
Query 213970 CCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG 214029
||||||| || | || ||||||| | || || | ||| | | |||||||
Sbjct 1416664 CCTGGTCGACGTAGCGAGCGGTGTTGTTGAAAACTCGAAGCATGGGGATGACACCGTTGG 1416723
Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCC 214089
| || ||||| || || || |||||||| | || | | | | | | | |
Sbjct 1416724 AGGTGCCATTGGTGCCGGCGATGTACGAGCCAGTAGCGCGAATGCGGTGGACGTTCATGC 1416783
Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149
| ||||| || || ||| ||||||||||| || | | | ||| || ||||||
Sbjct 1416784 CAATGCCGCCAGCCATCTTTGAGATCATGGCACACGTCTTGAGAGTGTCGTAGATGCCTT 1416843
Query 214150 CCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGC 214209
| ||| ||| || | | || | | |||||| || || || | | || | |
Sbjct 1416844 CGATGGAGTCCTCCTTCATGTCGACAAGGAAGCAAGAAGACAGTTGAGCCTGGGGGGTAC 1416903
Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269
| | |||||| || ||||| ||| ||| | | ||||||| | || | | ||||||
Sbjct 1416904 CGGCGTTGAACAGTGTGGGAGAGGCGTGGGTGAAAAACTTGCTTGACATCAAGTTGTAGG 1416963
Query 214270 TCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGT 214329
|||| | ||| | || || | ||| | ||| | ||| | |||||
Sbjct 1416964 TCTCGATGACGCGCTCAACGTTGTCCCCCCAGATACCGACAGCAACACGCATGATCATGT 1417023
Query 214330 GCTGGGGCCTCTCTATGGGTCCTTTGGGGCC--CTTGAGCAGGTAGGAGCGCTCCAGAGT 214387
||||||| ||||| | | ||| | || |||||| ||||| || | ||| || ||
Sbjct 1417024 GCTGGGG--TCTCTCGGCGATCTTCCCGTCCAGCTTGAGGAGGTATGACCTCTCAAGGGT 1417081
Query 214388 CTTGAACCCAAAGTA 214402
|||||| ||||||||
Sbjct 1417082 CTTGAAGCCAAAGTA 1417096
>seq449
Length=641369
Score = 129 bits (142), Expect = 1e-24
Identities = 333/504 (66%), Gaps = 9/504 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| | || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 271815 CTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCTCCGAGGGAGATGTTCTC 271874
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
||||||| ||||||||||| | || || ||| | ||||| | |||||
Sbjct 271875 CATGAAGTCGAAGGGGTTGGTAGACTTGTAGACCTTGTTGTTGCCCAGGGCAACAAGCAG 271934
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
| ||||| ||| |||||||||| | ||| | | | ||||||||| | || |
Sbjct 271935 ACGGTCCGCAACGAACTCGATGTACTGCTTCATCAAGTTCGAGTTCATGCCGAGAAGAGC 271994
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078
||||| ||||| || | ||||||| ||| |||| || || || | | ||| |
Sbjct 271995 GCAGGGCAGAGCCTCGGTCAAGAACTCCTGCTCAATCTTGACAGCGTCGACAATAATGTC 272054
Query 48079 CTTAACG--CGGGACTCT-GAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135
|| || | | | || | | | || ||| ||||| | | | | | ||||||
Sbjct 272055 CTCAATGACCTGCTTGCTAGGGCGGTTCTTG---AGGTG---AGAAAACAAGAGGCAGGC 272108
Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195
||||| |||| | || ||||| || ||| ||| |||| ||||| ||||| ||
Sbjct 272109 GAAGTCGGTGTGGAGACCCTCGTCACGAGAGATAAGCTCGTTAGAGAATGTCAGACCGGG 272168
Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255
||||| || | || || |||||||| || | ||||| | || |||||||| ||
Sbjct 272169 CATGAGACCGCGCTTCTTCAGCCAGAAGATGGAAGCGAAGGCACCGCTAAAGAAGATACC 272228
Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315
||| || || || || || || | || | || | | |||| ||| ||||||||
Sbjct 272229 CTCAACGGCAGCAAAGGCAACTAGACGCTGGGCAAAGGTGGACTTCTGGTCGGAGATCCA 272288
Query 48316 GGAAAGCGCCCAGTCTGCCTTCTT 48339
|| |||||||| ||||||||
Sbjct 272289 CTTGAGAGCCCAGTCGGCCTTCTT 272312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931526302558720
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