Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017- 01-05] 558 sequences; 52,387,045 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq380 95.1 2e-14 >seq380 Length=739652 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || |||||||| | || | | ||| || ||||| |||||||| || || |||| | Sbjct 523574 ATGTTGTAGTCGGACAGAGTACGACCATCCTCCAATTGCTTTCCGGCGAAGATCAATCGC 523515 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || || || || || || || || ||||| || || |||| || | ||| || ||| Sbjct 523514 TGCTGGTCGGGGGGAATACCCTCCTTATCCTGAATCTTGGACTTGACATTGTCGATCGTA 523455 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || ||||||||||| || || || || || || || || || || || || || || ||| Sbjct 523454 TCTGAAGACTCAACCTCAAGGGTGATTGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGC 523395 Query 193359 AT 193360 || Sbjct 523394 AT 523393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899648124910560