Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017-
01-05] 558 sequences; 52,387,045 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq449 100 2e-16
>seq449
Length=641369
Score = 100 bits (110), Expect = 2e-16
Identities = 195/286 (68%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410
|| |||||| ||||| ||||| || ||||||| | ||| ||| || ||| || |||
Sbjct 166169 ACGAACTTGTTAATGAAGCCATCGAGGTGGTCCTGAAGCTTGGCGGCGTTGTGTGAACCG 166228
Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470
|||| ||| | || || | | ||||| | || || || || |||||| | |||
Sbjct 166229 TTGATGATCCAACGGTCATCGGCGGGGTCGACGTTGGTCTGGGCACCGAGCTCGAAACCG 166288
Query 34471 AAGTACTTTGTCGGGTAAATG--GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGT 34528
|||||||| | | | || | | || || |||| | || |||| | || ||
Sbjct 166289 AAGTACTTGAT--GATGAAGGCACCGGGGCGAGCAAGAGACTGAGCGACGCTGCTCAGGT 166346
Query 34529 TGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCA 34588
|||||| || |||||||| ||||||||||| || |||| ||||| | || ||
Sbjct 166347 TGACGACAACGGTCTTGATACCGTTGCCCTTACCCTCGATCTTGGTGACGAGCTTTTCCA 166406
Query 34589 TTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCAC 34634
| |||||||| ||||| |||||| |||| ||| |||||| ||
Sbjct 166407 TCTTGTAGCGATAGAAAGCGTCCTTGACATCGCGACGAACGTTGAC 166452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412838792419094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |