Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017- 01-05] 558 sequences; 52,387,045 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq380 98.7 8e-16 >seq380 Length=739652 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | |||||| || ||||| || || ||||| || || | | || ||| | Sbjct 523607 CGGAGGACGAGATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCA 523548 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||| || || || | ||||||| ||||| || || ||||||||||| || Sbjct 523547 TCCTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCGGGGGGAATACCCTCCTTA 523488 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || | |||||| | || | || || ||| || || ||||| || || Sbjct 523487 TCCTG-AATCTTGGACTTGACATTGTCGATCGTATCTGAAGACTCAACCTCAAGGGTGAT 523429 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||| || || || |||||||| Sbjct 523428 TGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 523393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385216580268678