Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017-
01-05] 558 sequences; 52,387,045 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq289 111 2e-19
>seq289
Length=429572
Score = 111 bits (122), Expect = 2e-19
Identities = 199/288 (69%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 147106 ACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164
||||| ||||| ||| | |||||||| |||||||| ||||| || || |||||
Sbjct 229972 ACGTAGAACTGCGCAAAC-ATGTGGCAGGGCGGCAGGGCCATCTTCTTAAGATCGGCGGG 229914
Query 147165 GTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAAC 147224
|||||| || || | | || | | | ||||| |||| | || | ||| ||
Sbjct 229913 GTTCCACGCGCTGAGGAGGATGCGGCGGTCGTAAGGGTTTGTCTTGAGCTTGTGGATGAC 229854
Query 147225 CCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGC 147284
| || ||||| |||||||||||| |||| |||| | |||| |||||| |||
Sbjct 229853 CTCGGCGAGTTGGTCGACGCCCTGGCCCGTATAGTCTGTCTTGGAGTCGACGTACTCGGC 229794
Query 147285 CCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGA 147344
||||| || | ||| |||||||||||||| || || |||||||| | | ||| ||
Sbjct 229793 GCCAAAATGTCGCCATTGGAAGCCGTACACAGGACCGAGGTCGCCAACTTCGCGGTGGGA 229734
Query 147345 GAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392
|| ||| | | | ||| |||||| | || |||| ||||||||||
Sbjct 229733 GAGGCCGACGCTGTCGAGGAACTCGCGCGAGCCGTTTCCGTCCCAGAT 229686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583483930171200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |