Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017-
01-05] 558 sequences; 52,387,045 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq449 93.3 6e-14
>seq449
Length=641369
Score = 93.3 bits (102), Expect = 6e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 39607 AAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGA 39666
||||| | |||||||||||| || || ||||| || | | || | ||||||||
Sbjct 272094 AAACAAGAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATAAGCTCGTTAGA 272153
Query 39667 AAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCC 39726
||||| || || ||||| ||||| ||||| || ||||| || |||| ||| || | ||
Sbjct 272154 GAATGTCAGACCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAAGCGAAGGCACC 272213
Query 39727 AGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765
||||||||| || || || || ||||| ||||| ||
Sbjct 272214 GCTAAAGAAGATACCCTCAACGGCAGCAAAGGCAACTAG 272252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686904008811120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |