Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017- 01-05] 558 sequences; 52,387,045 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq449 93.3 6e-14 >seq449 Length=641369 Score = 93.3 bits (102), Expect = 6e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 39607 AAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGA 39666 ||||| | |||||||||||| || || ||||| || | | || | |||||||| Sbjct 272094 AAACAAGAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATAAGCTCGTTAGA 272153 Query 39667 AAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCC 39726 ||||| || || ||||| ||||| ||||| || ||||| || |||| ||| || | || Sbjct 272154 GAATGTCAGACCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAAGCGAAGGCACC 272213 Query 39727 AGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 ||||||||| || || || || ||||| ||||| || Sbjct 272214 GCTAAAGAAGATACCCTCAACGGCAGCAAAGGCAACTAG 272252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686904008811120