Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017-
01-05] 558 sequences; 52,387,045 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq380 93.3 4e-14
>seq380
Length=739652
Score = 93.3 bits (102), Expect = 4e-14
Identities = 164/238 (69%), Gaps = 1/238 (0%)
Strand=Plus/Minus
Query 27015 TTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTA 27073
|||||| || || || || || | || | ||| | || || || || ||||| |||||
Sbjct 523854 TTATTGACCGCCACGTAAACGGAGAACAAGATGGAGGGTTGATTCCTTCTGAATGTTGTA 523795
Query 27074 GTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATC 27133
|||||||| |||| | || || | ||| ||||| || | || ||||| || || ||
Sbjct 523794 GTCGCTCAGAGTGCGGCCATCCTCCAACTGCTTACCAGCAAAGATAAGACGTTGCTGGTC 523735
Query 27134 CGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGC 27193
|| || | |||||| || || |||||| |||| | | || | ||||||| |
Sbjct 523734 GGGGGGGATACCCTCCTTGTCTTGAATCTTGGACTTCACGTTGTCAATCGTGTCTGACGA 523675
Query 27194 TTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251
|| || || | || || | ||||| || ||||| || || |||||||||||| ||
Sbjct 523674 CTCGACCTCCAACGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCATACCT 523617
Score = 84.2 bits (92), Expect = 2e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||||||||| ||||| ||||| || | |||||| || || ||||| ||||| ||| |
Sbjct 523391 CCTCCGCGCAAACGCAACACCAAGTGGAGCGTAGACTCCTTCTGAATGTTGTAATCGGAC 523332
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || | || ||||| || || || ||| |||| || ||||| || || || ||
Sbjct 523331 AAAGTACGACCATCCTCGAGTTGCTTGCCAGCGAAAATCAGCCGCTGCTGGTCGGGGGGA 523272
Query 27141 ACACCCTCTTTATCGGCGATCTTG 27164
| ||||| || || |||||||
Sbjct 523271 ATGCCCTCCTTGTCCTGGATCTTG 523248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424931510180496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |