Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq3337 96.9 4e-15
>seq3337
Length=46210
Score = 96.9 bits (106), Expect = 4e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193
||| ||||| ||| ||| ||||||||||| | | || | |||||||| || || ||
Sbjct 4384 ACAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 4443
Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253
|| ||||| || |||||||| || ||||| || ||||| || || | ||| ||||||
Sbjct 4444 ACCCGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAGGCACCACTAAAGAA 4503
Query 24254 AATTCCTTCTACTGCCGCAAAGGCAA 24279
|| || || || || ||||||||||
Sbjct 4504 GATGCCCTCGACGGCAGCAAAGGCAA 4529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593689257015840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |