Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq855 197 2e-45 >seq855 Length=37984 Score = 197 bits (218), Expect = 2e-45 Identities = 374/550 (68%), Gaps = 54/550 (10%) Strand=Plus/Plus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 || ||| | ||| |||| || ||||||| | ||||||||| || || |||| |||||| Sbjct 2116 CAACTGCACCTTGAGGGCATCAACGTGGTCGGCGTAGACGTGGGCATCGCCCATGACGTG 2175 Query 145731 GATGAAGTCCCCGGGCTCGAGGCC-CGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGT 145789 | | | |||||| ||||| | | || | |||| | ||||| |||||||| | || Sbjct 2176 CGTCAGGCTGCCGGGCACGAGGTCGCATGTGC-GGGCAATCATGTGCGTCAGCAGCGCGT 2234 Query 145790 AGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGC 145849 |||| || |||||||| || || || || |||||||| | || |||||||||||||||| Sbjct 2235 AGCTCGCGATGTTGAAAGGTACTCCGAGGCCCATGTCGCAGGACCGCTGGTACAGCTGGC 2294 Query 145850 AGGAGAG---------------CTCCCC------------GCC-CGCC------------ 145869 || || |||||| ||| |||| Sbjct 2295 AGTGCAGGTGACCCTTGGGCTTCTCCCCTTCGGCGGGTGCGCCGCGCCCCCGCGGGTAGG 2354 Query 145870 --ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC 145926 ||||||||||| ||| | | |||||| || ||||||||||| || |||||| Sbjct 2355 AGACGTAGAACTGCGCA-AACATGTGGCATGGTGGCAGGGCCATCTTCTTTAGATCCGCC 2413 Query 145927 GGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCT 145983 |||||||| ||| |||||| || | | || ||| |||||| |||||| || Sbjct 2414 GGGTTCCACGCGCTGAGGAGGA---TGCGGCGATCGTAAGGGTTCGTCTTGAGCTTGTGG 2470 Query 145984 ATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTAC 146043 || | || |||||||| || ||||| ||| ||| || ||||||| ||| |||||| Sbjct 2471 ATAACCTCGGCAAGCTGGTCGACACCCTGACCCGTGTAGTCCGTCTTGGCGTCGACGTAC 2530 Query 146044 GCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTG 146103 |||| || ||||| | ||| ||||| || ||||| || || ||||| ||| || | | Sbjct 2531 TCGGCGCCAAAGTGTCGCCATTGGAATCCATAGACTGGGCCGAGGTCGCCGACTTCTCGG 2590 Query 146104 TGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACG 146163 ||| || ||| | | | | ||||| || || || |||||| ||||||| ||||||| | Sbjct 2591 TGCGAGAGGCCGACACTGTCCAGGAACTCACGTGAGCCGTTGCCGTCCCAAATCTTGATG 2650 Query 146164 CC--CCTCGC 146171 || |||||| Sbjct 2651 CCCGCCTCGC 2660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590044655566320