Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq855 197 2e-45
>seq855
Length=37984
Score = 197 bits (218), Expect = 2e-45
Identities = 374/550 (68%), Gaps = 54/550 (10%)
Strand=Plus/Plus
Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730
|| ||| | ||| |||| || ||||||| | ||||||||| || || |||| ||||||
Sbjct 2116 CAACTGCACCTTGAGGGCATCAACGTGGTCGGCGTAGACGTGGGCATCGCCCATGACGTG 2175
Query 145731 GATGAAGTCCCCGGGCTCGAGGCC-CGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGT 145789
| | | |||||| ||||| | | || | |||| | ||||| |||||||| | ||
Sbjct 2176 CGTCAGGCTGCCGGGCACGAGGTCGCATGTGC-GGGCAATCATGTGCGTCAGCAGCGCGT 2234
Query 145790 AGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGC 145849
|||| || |||||||| || || || || |||||||| | || ||||||||||||||||
Sbjct 2235 AGCTCGCGATGTTGAAAGGTACTCCGAGGCCCATGTCGCAGGACCGCTGGTACAGCTGGC 2294
Query 145850 AGGAGAG---------------CTCCCC------------GCC-CGCC------------ 145869
|| || |||||| ||| ||||
Sbjct 2295 AGTGCAGGTGACCCTTGGGCTTCTCCCCTTCGGCGGGTGCGCCGCGCCCCCGCGGGTAGG 2354
Query 145870 --ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC 145926
||||||||||| ||| | | |||||| || ||||||||||| || ||||||
Sbjct 2355 AGACGTAGAACTGCGCA-AACATGTGGCATGGTGGCAGGGCCATCTTCTTTAGATCCGCC 2413
Query 145927 GGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCT 145983
|||||||| ||| |||||| || | | || ||| |||||| |||||| ||
Sbjct 2414 GGGTTCCACGCGCTGAGGAGGA---TGCGGCGATCGTAAGGGTTCGTCTTGAGCTTGTGG 2470
Query 145984 ATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTAC 146043
|| | || |||||||| || ||||| ||| ||| || ||||||| ||| ||||||
Sbjct 2471 ATAACCTCGGCAAGCTGGTCGACACCCTGACCCGTGTAGTCCGTCTTGGCGTCGACGTAC 2530
Query 146044 GCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTG 146103
|||| || ||||| | ||| ||||| || ||||| || || ||||| ||| || | |
Sbjct 2531 TCGGCGCCAAAGTGTCGCCATTGGAATCCATAGACTGGGCCGAGGTCGCCGACTTCTCGG 2590
Query 146104 TGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACG 146163
||| || ||| | | | | ||||| || || || |||||| ||||||| ||||||| |
Sbjct 2591 TGCGAGAGGCCGACACTGTCCAGGAACTCACGTGAGCCGTTGCCGTCCCAAATCTTGATG 2650
Query 146164 CC--CCTCGC 146171
|| ||||||
Sbjct 2651 CCCGCCTCGC 2660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590044655566320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |