Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq245 118 2e-21
seq1559 105 1e-17
>seq245
Length=98725
Score = 118 bits (130), Expect = 2e-21
Identities = 381/586 (65%), Gaps = 23/586 (4%)
Strand=Plus/Plus
Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892
||||| || |||||| ||| || ||||| || |||| |||||||| | || ||
Sbjct 89226 TTCAAGACCTTGGAGAGATCTTACCTCCTGAAGCTTGACGGCAAGATTGCCGAGAGACCC 89285
Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACA---TAGAGAGCGTG 248949
||||||||| | ||||| || |||||||| || | || |||| | ||| ||||
Sbjct 89286 CAGCACATGATCATGCGTGTTGCTGTCGGAAT---CTGGGGCGACAACGTTGAGCGCGTT 89342
Query 248950 CTCGAGACGTACACCGGAATGA-GTGAACGCTGGATGACACATGCCACACCGACGCTCTT 249008
||||||| |||| | ||| | | | | | | || || ||| | || || |||||
Sbjct 89343 ATCGAGACCTACAACCTGATGTCGAGCAAGTTCT-TCACCCACGCCTCTCCCACACTCTT 89401
Query 249009 CAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGA 249068
||||||||||||| | | |||||| ||| || || ||| | | ||| | || ||
Sbjct 89402 CAACGCCGGTACCCCCCAGGCGCAGCTGTCCTCTTGTTTCCTTGTCGATATGAAGGAGGA 89461
Query 249069 CTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGC 249125
|||| |||| || || || ||||| || | |||| || | ||| || || | ||
Sbjct 89462 CTCTATCGAGGGTATCTACGACACCCTCA---AGACCTGTGCTATGATCTCCAAGATGGC 89518
Query 249126 GGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTAC 249185
|| || || |||||| |||| | |||||| || | || || ||||| || ||
Sbjct 89519 TGGTGGCATTGGTCTCAACGTCCACCGCATCCGCGCTACCGGCTCTTACATTGCTGGCAC 89578
Query 249186 AAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTT 249245
|| || | | | || |||| ||| | || || ||| | ||| ||| | |
Sbjct 89579 CAACGGCACCTCTAACGGCGTCGTTCCCATGCTCCGTGTCTTCAACAACACTGCCCGCTA 89638
Query 249246 CATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTG 249299
| || |||||| ||| ||||| || | || ||||| || | || ||
Sbjct 89639 CGTCGACCAGGGCGGAAACAAGCGCC---CCGGTGCTTTTGCCATCTACCTCGAGCCTTG 89695
Query 249300 GCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAG 249359
|||||| ||| |||| || ||| |||| || |||||| | || || ||| | |
Sbjct 89696 GCACGCTGATGTATTTGACTTCTTGGATCTGCGCAAGAACCATGGGAAGGAGGAGGTCCG 89755
Query 249360 AGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405
|| |||||||| || || ||| ||| || |||| | ||||||
Sbjct 89756 CGCTCGTGACCTATTTCTCGCCCTCTGGATCCCCGATCTCTTCATG 89801
>seq1559
Length=209146
Score = 105 bits (116), Expect = 1e-17
Identities = 130/178 (73%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261
|| ||||| || ||| || | ||||| |||||||| || | |||||| |||||||||
Sbjct 31225 TGCCCGCCCTTTAAGATCATCATCCTTGACGAGGCCGATTCAATGACGCAGGACGCGCAG 31284
Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321
||||||||| || || |||||||| || | | ||||| || ||||| | |||
Sbjct 31285 AGCGCCCTCCGTCGGACCATGGAGACATACAGCAAGATCACGCGGTTCTGCCTCATCTGC 31344
Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
|||||||| || ||||| | ||| || ||| ||| ||| ||||||||| ||||
Sbjct 31345 AACTACGTCACGCGCATCATTGACCCTCTTGCTAGTCGTTGCAGCAAGTTTCGCTTCA 31402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073706444239744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |