Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3337 107 2e-18 >seq3337 Length=46210 Score = 107 bits (118), Expect = 2e-18 Identities = 150/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 ||| ||||| ||| ||||||||||||||| | | || | ||||| || || || || Sbjct 4384 ACAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 4443 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 || ||||| || |||||||| || ||||| || ||||| ||||| | || |||||| Sbjct 4444 ACCCGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAGGCACCACTAAAGAA 4503 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---G 33757 ||| || || || ||||||||||||| || | || | | || | |||| Sbjct 4504 GATGCCCTCGACGGCAGCAAAGGCAACCAGGCGCTGGGCGAAGGAGGACTTCTCATCGCT 4563 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTT 33787 |||||||| | ||||| ||||||||||| Sbjct 4564 AATCCACTTGAGGGCCCAGTCGGCCTTCTT 4593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629783290686240