Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq3337 107 2e-18
>seq3337
Length=46210
Score = 107 bits (118), Expect = 2e-18
Identities = 150/210 (71%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640
||| ||||| ||| ||||||||||||||| | | || | ||||| || || || ||
Sbjct 4384 ACAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 4443
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
|| ||||| || |||||||| || ||||| || ||||| ||||| | || ||||||
Sbjct 4444 ACCCGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAGGCACCACTAAAGAA 4503
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---G 33757
||| || || || ||||||||||||| || | || | | || | ||||
Sbjct 4504 GATGCCCTCGACGGCAGCAAAGGCAACCAGGCGCTGGGCGAAGGAGGACTTCTCATCGCT 4563
Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTT 33787
|||||||| | ||||| |||||||||||
Sbjct 4564 AATCCACTTGAGGGCCCAGTCGGCCTTCTT 4593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629783290686240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |