Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq855 122 7e-23 >seq855 Length=37984 Score = 122 bits (134), Expect = 7e-23 Identities = 303/459 (66%), Gaps = 56/459 (12%) Strand=Plus/Plus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 |||| ||||||||||| | ||| |||||||| || |||| | |||| | | || || Sbjct 2129 AGGGCATCAACGTGGTCGGCGTAGACGTGGGCATCGCCCATGACGTGCGTCAGG-CTGCC 2187 Query 20985 GGGGTC-AGGCC-CGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGT 21042 ||| | ||| | | || | | || |||| | |||||| || |||||||| ||||||| Sbjct 2188 GGGCACGAGGTCGCATGT-GCGGGCAATCATGTGCGTCAGCAGCGCGTAGCTCGCGATGT 2246 Query 21043 TAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAG----- 21097 | || || || ||||||||||||||| ||||| |||||||||||||||| ||| Sbjct 2247 TGAAAGGTACTCCGAGGCCCATGTCGCAGGACCGCTGGTACAGCTGGCAGTGCAGGTGAC 2306 Query 21098 ----------CTCCCC-------------CCGAGCC--------------ACGTAAAACT 21120 |||||| ||| ||| ||||| |||| Sbjct 2307 CCTTGGGCTTCTCCCCTTCGGCGGGTGCGCCGCGCCCCCGCGGGTAGGAGACGTAGAACT 2366 Query 21121 GACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCG 21179 | | |||| | ||| || || || || |||||| | || ||||| |||||||||||| Sbjct 2367 G-CGCAAACATGTGGCATGGTGGCAGGGCCATCTTCTTTAGATCCGCCGGGTTCCACGCG 2425 Query 21180 CACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAA----TTAGATCCACCACGTAACG 21235 | | | |||||| ||||||| || | | || | | ||| ||| || | Sbjct 2426 CTGAGGAGGATGCGGCGATCGTAAGGGTTCGTCTTGAGCTTGTGGAT-AACCTCGGCA-- 2482 Query 21236 CAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAA 21295 |||||||| || ||||||||| ||||| | | ||| | |||||| || ||||| Sbjct 2483 -AGCTGGTCGACACCCTGACCCGTGTAGTCCGTCTTGGCGTCGACGTACTCGGCGCCAAA 2541 Query 21296 ATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCC 21334 |||| ||| ||||| || || || || || || ||||| Sbjct 2542 GTGTCGCCATTGGAATCCATAGACTGGGCCGAGGTCGCC 2580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427753279479840