Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq3337 116 5e-21
>seq3337
Length=46210
Score = 116 bits (128), Expect = 5e-21
Identities = 152/210 (72%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018
||| ||||| ||| ||||||||||||||| | | || || |||||||| || || ||
Sbjct 4384 ACAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 4443
Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078
|| ||||| || |||||||| || ||||| || ||||| || || | ||| ||||||
Sbjct 4444 ACCCGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAGGCACCACTAAAGAA 4503
Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCAT---G 50135
||| || || || || ||||||||||| || | || | | || | ||||
Sbjct 4504 GATGCCCTCGACGGCAGCAAAGGCAACCAGGCGCTGGGCGAAGGAGGACTTCTCATCGCT 4563
Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTT 50165
|||||||| | ||||| |||||||||||
Sbjct 4564 AATCCACTTGAGGGCCCAGTCGGCCTTCTT 4593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718229672307120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |