Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq274 113 4e-20
>seq274
Length=111205
Score = 113 bits (124), Expect = 4e-20
Identities = 179/254 (70%), Gaps = 2/254 (1%)
Strand=Plus/Plus
Query 5501 ACGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCT 5560
||||||||| ||||| ||||| ||||| | | | || || || || |||||
Sbjct 87877 ACGCCCGTGCTGCCGAAGCCGCCGGCGCCGCGCACGCTCTCCTCGAGCTCGGCGACCTCG 87936
Query 5561 TCCACATCGGGGAACGCAGC-GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTT 5619
| | |||||| | || |||||| || ||||| || | |||||||||
Sbjct 87937 ACGATCTCGGGGGT-GAAGATGCGCTCCACGACGAGCTGGGCGACGCGGTCGCCCTCGGC 87995
Query 5620 TACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTC 5679
|||||||| ||| || | || |||||| || | || || | ||||||||||||
Sbjct 87996 GACCTCGAAGTCGGCGTCGGCGTGGTTGAAGAGGAGGACCTTGACCTCGCCGCGGTAGTC 88055
Query 5680 GGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGG 5739
|||||| || ||||| ||||| ||||||||||| |||| | || ||||||||||||||
Sbjct 88056 GGCGTCGATGACGCCGGCGCCAGTGTCGATGAAGTTCTTGGCAGCGAGGCCGGAGCGGGG 88115
Query 5740 AGCCACGCGGCCGT 5753
|| | ||||||||
Sbjct 88116 GGCGATGCGGCCGT 88129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430031558466896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |