Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq245 105 6e-18
>seq245
Length=98725
Score = 105 bits (116), Expect = 6e-18
Identities = 166/233 (71%), Gaps = 10/233 (4%)
Strand=Plus/Minus
Query 148250 CTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACA 148309
|||||| || ||||| ||| |||||||||| | ||| ||||| ||| | ||| || ||
Sbjct 89909 CTCGTACTTCTCGTACAGGGCCTCGAATTCCTCGCCGTAGCAGTCGGCGAGACCAGGGCA 89850
Query 148310 CTCGTCGGGGCACATCAATGACCATTTCCC-TCCTGTCTTTACCCTCTTCATAAACAGAT 148368
||||| ||||||||| | | ||| | || | || ||| || |||||||| || ||||
Sbjct 89849 CTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCT-TCTCCACTCTCTTCATGAAGAGAT 89791
Query 148369 CAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGGCACCCATA---- 148424
| || |||| | ||| | || || || ||||| | ||||| |||||
Sbjct 89790 CGGGGATCCAGAGGGCGAGAAATAGGTCACGAGCGCGGACCTCCTCCTT-CCCATGGTTC 89732
Query 148425 TTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGTA 148477
|||||| |||||||| || ||| || || |||||||||||||||| |||
Sbjct 89731 TTGCGC---AGATCCAAGAAGTCAAATACATCAGCGTGCCAAGGCTCGAGGTA 89682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478636324865760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |