Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq245 105 6e-18 >seq245 Length=98725 Score = 105 bits (116), Expect = 6e-18 Identities = 166/233 (71%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 148250 CTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACA 148309 |||||| || ||||| ||| |||||||||| | ||| ||||| ||| | ||| || || Sbjct 89909 CTCGTACTTCTCGTACAGGGCCTCGAATTCCTCGCCGTAGCAGTCGGCGAGACCAGGGCA 89850 Query 148310 CTCGTCGGGGCACATCAATGACCATTTCCC-TCCTGTCTTTACCCTCTTCATAAACAGAT 148368 ||||| ||||||||| | | ||| | || | || ||| || |||||||| || |||| Sbjct 89849 CTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCT-TCTCCACTCTCTTCATGAAGAGAT 89791 Query 148369 CAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGGCACCCATA---- 148424 | || |||| | ||| | || || || ||||| | ||||| ||||| Sbjct 89790 CGGGGATCCAGAGGGCGAGAAATAGGTCACGAGCGCGGACCTCCTCCTT-CCCATGGTTC 89732 Query 148425 TTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGTA 148477 |||||| |||||||| || ||| || || |||||||||||||||| ||| Sbjct 89731 TTGCGC---AGATCCAAGAAGTCAAATACATCAGCGTGCCAAGGCTCGAGGTA 89682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478636324865760