Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq245 370 3e-97
seq3337 93.3 1e-13
>seq245
Length=98725
Score = 370 bits (410), Expect = 3e-97
Identities = 1067/1628 (66%), Gaps = 30/1628 (2%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| |||||| | || ||| | | ||| || || || | | | ||| |||| |||
Sbjct 89376 TTCACCCACGCCTCTCCCACACTCTTCAACGCCGGTACCCCCCAGGCGCAGCTGTCCTCT 89435
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
|| || ||| | | |||||||| || || ||||||||||||| ||||| || ||||
Sbjct 89436 TGTTTCCTTGTCGATATGAAGGAGGACTCTATCGAGGGTATCTACGACACCCTCAAGACC 89495
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
|||||| | || ||||||| || || || |||||| | | || ||||| | || ||
Sbjct 89496 TGTGCTATGATCTCCAAGATGGCTGGTGGCATTGGTCTCAACG-TCCACCGCATCCGCGC 89554
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|| | | ||||||| ||||| || ||| || || | ||||||||||| |
Sbjct 89555 TACCGG-CTCTTACATTGCTGGCACCAACGGCACCTCTAACGGCGTCGTTCCCATGCTCC 89613
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
|||| || |||| ||||| | |||||||||||||| ||| |||||| || || |
Sbjct 89614 GTGTCTTCAACAACACTGCCCGCTACGTCGACCAGGGCGGAAACAAGCGCCCCGGTGCTT 89673
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
|||| || || ||||||||| || || ||| | ||||| || | || || || || |
Sbjct 89674 TTGCCATCTACCTCGAGCCTTGGCACGCTGATGTATTTGACTTCTTGGATCTGCGCAAGA 89733
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|| || || ||||| | || || ||||| || || || || ||| | | || |
Sbjct 89734 ACCATGGGAAGGAGGAGGTCCGCGCTCGTGACCTATTTCTCGCCCTCTGGATCCCCGATC 89793
Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATG 364022
|| |||||| | |||||| | | | | | ||| | ||| | ||||| |||| ||
Sbjct 89794 TCTTCATGAAGAGAGTGGAG--AAGAACGGCGACTGGACTCTCATGTGCCCCAACGAGTG 89851
Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082
|| ||||| |||| | || || || | | || || ||||| ||||| ||
Sbjct 89852 CCCTGGTCTCGCCGACTGCTACGGCGAGGAATTCGAGGCCCTGTACGAGAAGTACGAGCA 89911
Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142
| ||| || | ||| ||||| | || || ||||| |||| ||||||| | || |
Sbjct 89912 GATGGGCAAAGGTCGCAAGACCCTAAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGC 89971
Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202
|| | ||||| || | |||| |||| | ||||| ||| | |||||||||| |||
Sbjct 89972 TCAAACCGAGACTGGTAACCCCTTTATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAA 90031
Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACAC 364262
|||| || |||| ||||| || | | ||||||||| || ||||| ||||| |||
Sbjct 90032 CCAGAAGAACCTGGGTACCATCCGTAACTCCAACCTATGCACTGAGATCATTGAGTACTG 90091
Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--- 364319
|||||| || ||| || || || ||||| || ||| | ||||| || | || ||
Sbjct 90092 CGCTCCTGATGAGGTCGCAGTGTGCAACCTGGCCTCGCTTGCGCTGCCCACCTTCGTTGA 90151
Query 364320 ---AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACT 364374
|| || ||| || ||| |||| | ||| | || || ||| | || | | |
Sbjct 90152 CTACAACGAGGGTGTTTACGACTTCCAGAAGCTTCACGAGGTCACCCAGGTCGTCGT--T 90209
Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGC 364429
|||| ||| ||| | ||||| || | || || | | || || || |||
Sbjct 90210 CGCAACCTCAACAGAATCATCGATGTCAACCACTACCCGGTCCAGGAGGCTCGCAACAGC 90269
Query 364430 GTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTA 364489
|| ||||| || ||||| |||||||| ||||| ||||| || || || | ||
Sbjct 90270 -----AACATGCGCCACCGCCCCATTGGTCTCGGTGTTCAGGGTCTTGCCGATGCCTTCT 90324
Query 364490 TGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTG 364549
|| ||| ||| | || || || || || ||||||| || || ||| ||||||| |
Sbjct 90325 TGGCCCTCCGCATGCCCTTCGAGTCCCCCGAAGCTCGTGACCTCAACAAGAAGATCTTCG 90384
Query 364550 AAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGT 364609
| ||||| || || || | || ||| | | ||||| || |||| |
Sbjct 90385 AGACAATCTACCACGCTGCCCTTACCATGTCGGTTCAGTTGGCCAAGGAGGAGGGCCCCT 90444
Query 364610 ACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATG 364669
| || |||||||| |||||| |||| ||||| | |||||| || | |||||||
Sbjct 90445 ATCAGACGTATGAGGGTTCCCCTGTTTCTCAGGGCATCCTCCAGTACGACATGTGGAATG 90504
Query 364670 TCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGT 364728
||| || || | | ||| |||||||| | || | | | | | ||| |||| |||
Sbjct 90505 TCAAACCCTCGGATCTCTGGGACTGGGATTCTCTGAAGGAGC-AGATCAAGCAGCACGGT 90563
Query 364729 ACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGA 364788
|||||||| || | ||||||||||| || || || | |||||| | ||
Sbjct 90564 GTCCGCAACTCTCTGCTCGTCGCGCCCATGCCGACTGCCAGCACCTCTCAGATCTTGGGT 90623
Query 364789 AACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGA 364848
|||||||||||||||||||| | || ||| |||| || || || ||| | ||
Sbjct 90624 AACAACGAGTGCTTCGAACCTTACACCTCCAACATTTACCAGCGTCGTGTCCTTGCTGGC 90683
Query 364849 GAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGT 364908
|| || | || || || | || | ||||| || |||| || ||||| |
Sbjct 90684 GAGTTCCAAGTCGTCAACCCTTGGCTCTTGAAGGACCTCGTCGACATGGGCTTGTGGTCT 90743
Query 364909 GACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTT 364968
||| ||||||||| ||||| |||| || |||||| | |||||||| || ||
Sbjct 90744 GACGCTATGAAGAACCGCATCATTGCCGAGAACGGTTCTATTCAGAACATCCCCAACATT 90803
Query 364969 CCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATT 365028
|| || | ||| | | ||||| || || |||||||| ||| ||| || | |
Sbjct 90804 CCTACCGAGGTCAAGGCGCTGTACAAGACTGTTTGGGAAATCTCCCAGCGCACCGTTGTG 90863
Query 365029 GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATG 365088
| ||||| ||||| || || || || ||| ||| |||||| | ||| | ||||
Sbjct 90864 CAAATGGCTGCCGACCGTGGCGCCTTCATCGACCAGTCGCAGTCGCTCAACATCCACATG 90923
Query 365089 ACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTT 365148
| | || || | |||| | || |||||| ||| || ||||| ||| ||
Sbjct 90924 AAAGACCCGACTATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGACTG 90983
Query 365149 AAGACAGG 365156
||||| ||
Sbjct 90984 AAGACGGG 90991
>seq3337
Length=46210
Score = 93.3 bits (102), Expect = 1e-13
Identities = 148/210 (70%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGA-ACGT--TCATTCGCGGAACGT 22494
|| ||||| || ||||| || || ||||| | | |||| | || || ||||| | ||
Sbjct 4593 AAGAAGGCCGACTGGGCCCTCAAGTGGATTAGCGATGAGAAGTCCTCCTTCGCCCAGCGC 4534
Query 22495 CTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTT 22554
|| |||| ||||||| || || ||||| |||||| ||| || || | |||||
Sbjct 4533 CTGGTTGCCTTTGCTGCCGTCGAGGGCATCTTCTTTAGTGGTGCCTTCGCATCCATCTTC 4474
Query 22555 TGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGA 22614
||||| || || |||| | ||||||||||| || || || || ||| | || ||
Sbjct 4473 TGGCTCAAGAAGCGTGGTCTCATGCCGGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 4414
Query 22615 GATGAGGGTCTTCATACCGATTTTGCGTGT 22644
|| |||||||| || ||||| || || |||
Sbjct 4413 GACGAGGGTCTGCACACCGACTTCGCCTGT 4384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303280824807956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |