Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3337 98.7 1e-15 >seq3337 Length=46210 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| ||||| ||| ||| ||||||||||| | | || | |||||||| || || || Sbjct 4384 ACAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 4443 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || ||||| || |||||||| || ||||| || ||||| || || | ||| |||||| Sbjct 4444 ACCCGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAGGCACCACTAAAGAA 4503 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---G 32836 || || || || || |||||||||| || | || | | || | |||| Sbjct 4504 GATGCCCTCGACGGCAGCAAAGGCAACCAGGCGCTGGGCGAAGGAGGACTTCTCATCGCT 4563 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTT 32866 |||||||| | ||||| ||||||||||| Sbjct 4564 AATCCACTTGAGGGCCCAGTCGGCCTTCTT 4593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633597482896800