Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq3337 82.4 9e-11
>seq3337
Length=46210
Score = 82.4 bits (90), Expect = 9e-11
Identities = 157/230 (68%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151
|| || |||||||| || | ||| ||||| || || || | ||| ||| ||| || | |
Sbjct 4385 CAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 4444
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
|| || | || || || ||||||||||| || || || || || |||| ||| ||
Sbjct 4445 CCCGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAGGCACCACTAAAGAAG 4504
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT---ACTG 93268
|| || || ||||| ||||| || || | || | ||| || | ||| || | |
Sbjct 4505 ATGCCCTCGACGGCAGCAAAGGCAACCAGGCGCTGGGCGAA---GGAGGACTTCTCATCG 4561
Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318
|| ||||| || | ||||| ||||| || || ||| ||||| | |||
Sbjct 4562 CTAATCCACTTGAGGGCCCAGTCGGCCTTCTTGCGAATGCAAGGGACTGT 4611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556830465007920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |