Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq3878 82.4 6e-11
>seq3878
Length=33396
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||||||||| || | | || | || | || || || || || ||||||||||||||
Sbjct 29589 ACCGCCACGCAGACGAAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGCT 29530
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| || ||| || || ||||| || |||||| | || || ||||| ||||| || ||
Sbjct 29529 CAGGGTGCGACCGTCCTCCAGTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGG 29470
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
|| || || ||||| || || || | | || | ||||| | || || ||
Sbjct 29469 GATACCCTCCTTGTCTTGGATTTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCAAC 29410
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| || | ||| || ||||||| || || ||||| || |||||
Sbjct 29409 CTCCAACGTAATCGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 29362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420112085349096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |