Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq245 396 5e-105
seq3337 266 6e-66
>seq245
Length=98725
Score = 396 bits (438), Expect = 5e-105
Identities = 924/1379 (67%), Gaps = 61/1379 (4%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || || || ||||| || | || || || |||||||| | |||| | || ||
Sbjct 90701 GTTGACGACTTGGAACTCGCCAGCAAGGACACGACGCTGGTAAATGTTGGAGGTGTAAGG 90642
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
|||| || ||| |||| |||| ||||| | ||||| |||||||||||||||| ||
Sbjct 90641 TTCGAAGCACTCGTTGTTACCCAAGATCTGAGAGGTGCTGGCAGTCGGCATGGGCGCGAC 90582
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCC---AGTC 244266
|||||| ||| | || |||||| || ||| ||| ||| ||| | ||
Sbjct 90581 GAGCAGAGAGTTGCGGACACCGTGCTGCTTGAT-------CTG--CTCCTTCAGAGAATC 90531
Query 244267 CCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326
||| | || |||| ||| | |||||| ||||||||| |||| || | ||||
Sbjct 90530 CCA---GTCCCAGAGATCCGAGGGTTTGACATTCCACATGTCGTACTGGAGGATGCCCTG 90474
Query 244327 GCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGC 244385
|| ||| ||||| || ||| | ||||| || || || ||||| || | | |
Sbjct 90473 AGAAACAGGGGAACCCTCATACGTCTGATAGGGGCCCTCCTCCTTGGCCAACTGAACCGA 90414
Query 244386 TCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT 244445
| || ||||| |||| |||||| |||||||||||| ||||||| | ||| || || |
Sbjct 90413 CATGGTA-AGGGCAGCGTGGTAGATTGTCTCGAAGATCTTCTTGTTGAGGTCACGAGCTT 90355
Query 244446 TGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGA 244505
| | | |||||| |||| | || |||| | ||||| || ||||| || ||||
Sbjct 90354 CGGGGGACTCGAAGGGCATGCGGAGGGCCAAGAAGGCATCGGCAAGACCCTGAACACCGA 90295
Query 244506 TGCCGATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTG 244564
|| ||||| | ||| ||| ||||| | || | || | || || ||||| ||||
Sbjct 90294 GACCAATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGG-ACCGGGTAGTGGTTG 90236
Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGA 244624
| ||||| | ||||||||||||| || | || ||| ||| ||| |||
Sbjct 90235 ACATCGATGATTCTGTTGAGGTTGCGAACGACGACCTGGGTGACCTCGTGAAGCTTCTGG 90176
Query 244625 AAGTCGTA------CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGG 244678
|||||||| ||||| | | || ||| |||| | | |||
Sbjct 90175 AAGTCGTAAACACCCTCGTTG---TAGTCAACGAAGGTGGGCAGCGCAA----------- 90130
Query 244679 GCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCG 244738
|||| |||||||||||| || || ||||| || | | ||||| | |||||
Sbjct 90129 GCGA----GGCCAGGTTGCACACTGCGACCTCATCAGGAGCGCAGTACTCAATGATCTCA 90074
Query 244739 GTGCAGAGGTTACTGCACTT---GATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTG 244795
||||| ||||| | | || |||||| ||||||| || || ||| |||| ||||
Sbjct 90073 GTGCATAGGTT---GGAGTTACGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTG 90017
Query 244796 CAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTG 244855
|| |||||||||||||| ||||| || |||||| || || |||||| |
Sbjct 90016 GCAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCGGTTTGAGCCTCGAGGATGGCA 89957
Query 244856 TTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCC-TCTGCCTCGTAGCGGGT 244914
| |||||| | ||||| | ||| ||||| | |||||| ||||| |||||
Sbjct 89956 TACCAGAGCTTTTGGGCCTTTAGGGTCTTGCGACCTTTGCCCATCTGC-TCGTACTTCTC 89898
Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCA 244974
||||||||||||||| || ||| || ||| | || || |||||| |||||
Sbjct 89897 GTACAGGGCCTCGAATTCCTCGCCGTAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCA 89838
Query 244975 CATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAG 245034
||||||| |||| |||||| | || || |||| ||||||||| ||||||||||||||
Sbjct 89837 CATGAGAGTCCAGTCGCCGTTCTTCTCCACTCTCTTCATGAAGAGATCGGGGATCCAGAG 89778
Query 245035 GGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAA 245094
||| | || ||||| | | | ||| ||| ||| |||||| | ||| |||||
Sbjct 89777 GGCGAGAAATAGGTCACGAGCGCGGACCTCCTCCTTCCCATGGTTCTTGCGCAGATCCAA 89718
Query 245095 AAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTT 245154
|||||||| || || ||||||| ||||| | ||||| || | || ||||| |||||
Sbjct 89717 GAAGTCAAATACATCAGCGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGGCGCTT 89658
Query 245155 GTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTA 245213
||| || |||||||| || | | || | |||||||| || || | || || |
Sbjct 89657 GTTTCCGCCCTGGTCGACGTAGCGGGC-AGTGTTGTTGAAGACACGGAGCATGGGAACGA 89599
Query 245214 TGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGA 245273
|||||||||| |||||||||||| ||||| | ||| | | | || ||| |
Sbjct 89598 CGCCGTTAGAGGTGCCGTTGGTGCCAGCAATGTAAGAGCCGGTAGC---GCGGATGC-GG 89543
Query 245274 TGGAC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTG 245329
||||| | || | || || || ||||||||| | || ||| |||||| ||||
Sbjct 89542 TGGACGTTGAGACCAATGCCACCAGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTG 89483
Query 245330 TCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGG 245389
|| || ||||| || |||| |||||| | || || || || |||||||||||
Sbjct 89482 TCGTAGATACCCTCGATAGAGTCCTCCTTCATATCGACAAGGAAACAAGAGGACAGCTGC 89423
Query 245390 GGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGA 245448
| || |||| | | | |||||| || ||||| ||||||||| ||| | ||||||
Sbjct 89422 GCCTGGGGGGTACCGGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGAAGAACTTGCTCGA 89364
>seq3337
Length=46210
Score = 266 bits (294), Expect = 6e-66
Identities = 366/503 (73%), Gaps = 9/503 (2%)
Strand=Plus/Minus
Query 42645 AAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAG 42703
|||||||| |||||||| ||||| ||||| || | || | | | |||| | || |
Sbjct 4593 AAGAAGGCCGACTGGGCCCTCAAGTGGATT-AGCGATGAGAAGTCCTCCTTCGCCCAGCG 4535
Query 42704 GCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTT 42763
||||| |||||| | |||||||||||||||||||| || |||||||| ||||||||
Sbjct 4534 CCTGGTTGCCTTTGCTGCCGTCGAGGGCATCTTCTTTAGTGGTGCCTTCGCATCCATCTT 4475
Query 42764 CTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822
|||||||||| || ||| || ||||| || || |||||||| ||||| ||||||
Sbjct 4474 CTGGCTCAAGAAGCGTGGTCTC-ATGCCGGGTCTGACCTTCTCCAACGAGCTCATCTCTC 4416
Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA 42882
| |||||||| ||||| | ||||| ||||| ||| ||| || |||||||| | ||
Sbjct 4415 GTGACGAGGGTCTGCACACCGACTTCGCCTGTCTCTTGTATTC---CCACCTCAAGAACC 4359
Query 42883 AGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGT 42942
||| ||| || || || |||||| || || || |||| ||| ||||||
Sbjct 4358 GCCCCAGCAAGCAGGTTATCGAGGACATCATTGTCGATGCTGTCAAGATTGAGCAGGAGT 4299
Query 42943 TCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGT 43002
|||| ||| || | || || ||||| ||||||||||| | |||| ||| |||
Sbjct 4298 TCCTGACGGAGGCTCTTCCTTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAGCAGT 4239
Query 43003 ACATCCAGTACGTCGCCGACCATCTCC-TGTGCCAGATGGGTCTCAGCCGCCTCTACAAC 43061
|||| ||| ||| ||||||| ||||| ||| | | | || | |||||||
Sbjct 4238 ACATTGAGTTCGTTGCCGACCGTCTCCTTGTTGC-GCTTGGCAACGAAAAGGTCTACAAG 4180
Query 43062 ACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTC 43121
| | |||||||||||| |||||||||||||| ||| |||||||||||||| |||
Sbjct 4179 TCTTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTC 4120
Query 43122 GAGAAGCGCGTCGCCGACTACCA 43144
|||||||| || |||||||||||
Sbjct 4119 GAGAAGCGTGTTGCCGACTACCA 4097
Score = 120 bits (132), Expect = 6e-22
Identities = 232/336 (69%), Gaps = 11/336 (3%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| ||||||||| |||||||||||| ||
Sbjct 5004 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCAGAGGAGATTGACTTG 4945
Query 42360 GCCAAGGACACGGCCGGCTGGGA-GTCACTGTC--TGAGAACGAAAAGTTTTTCCTCAAA 42416
||||||| | || |||| | || || ||| | || |||| ||| ||
Sbjct 4944 TCCAAGGATCTGCACGACTGGAACAACAAGATCAACGAGGATGAGAAGTACTTCATCTCG 4885
Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476
|||| || |||||||| ||||| || |||||||| |||||||||||| ||| | |
Sbjct 4884 CACATTCTCGCCTTCTTTGCCGCTTCCGACGGCATCGTCAATGAGAACTTGGTCGAGCGC 4825
Query 42477 TTCATGAAAGAGGTGC-AGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| | ||| | || || ||||| ||||| ||||||||||| ||
Sbjct 4824 TTCAGCGGCGAGGTTCAAGTGC-CCGAAGCCCGCTGTTTCTATGGCTTCCAGATTATGAT 4766
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||| | || || ||| ||| | ||||||| |||| |||||| ||| ||
Sbjct 4765 GGAGAACATCCATTCCGAGACCTACTC---GCTGCTCATCGACACCTACATCAAGGAGCC 4709
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628
| | |||| | || ||||| ||||| || ||
Sbjct 4708 GGCCCAGCGCACGTACCTTTTCAACGCCATCGACAC 4673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944287757122080
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