Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq3337 98.7 2e-15
seq3441 96.9 8e-15
>seq3337
Length=46210
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603
|| ||| |||| ||| || | ||||||||||| | || ||| |||||||| ||
Sbjct 4290 GAGGCTCTTCCTTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATTGAG 4231
Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663
||||| |||||||| | | | |||||||| | || || || ||||| || |||
Sbjct 4230 TTCGTTGCCGACCGTCTCCTTGTTGCGCTTGGCAACGAAAAGGTCTACAAGTCTTCCAAC 4171
Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723
||||| | ||| |||||| ||| || || || || || ||||||||||| ||||||
Sbjct 4170 CCCTTCGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGT 4111
Query 243724 GTCAGTGATTATCAACGCCCTGGTGTGATGAA 243755
|| || || ||| ||||||| |||||
Sbjct 4110 GTTGCCGACTACCAAAAGGCTGGTGTCATGAA 4079
>seq3441
Length=28323
Score = 96.9 bits (106), Expect = 8e-15
Identities = 199/288 (69%), Gaps = 6/288 (2%)
Strand=Plus/Plus
Query 298084 TACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACA 298143
|||||| || |||||||||| | ||||| | || |||| | |||| ||| |
Sbjct 19006 TACGATGGGAGTGATGAACTCCCGGAAGAAGTCGGGGATTTGCAAAAGAGATGGGTACTG 19065
Query 298144 GCTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGT 298203
| || || ||||| || | ||||| ||||||| ||||| |||| ||||
Sbjct 19066 GACTTGCAAGAAGTTGATAAGAAGACCCTTGATGTGAGAACCGTCGTGATCCTGATCGGC 19125
Query 298204 CATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTT-T 298262
||||||||||| |||||| || || || ||| ||| |||| | | | || |
Sbjct 19126 CATGATCATCAGATGACCATAGCGTAGACTCTTCGTATCTGTGTAGG-TCTGCTTGTGCT 19184
Query 298263 GAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG-CCAC 298320
|| ||||| | || |||| | ||| |||||| | |||||||||||| || | | |
Sbjct 19185 TCAGACCGAGGAACTGCTTGATGTTCTG-GATTTCCTGGTTCTTCGTGAT-CTGGTCGAT 19242
Query 298321 GGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCC 298368
|||||| || ||||| ||||| | ||| |||||||| ||||| |||||
Sbjct 19243 GGATGCGTCACGGACGTTCAACATTTTACCACGAAGGGGGAAGACTCC 19290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102818418627300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |