Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq245 201 1e-46 seq3337 118 1e-21 >seq245 Length=98725 Score = 201 bits (222), Expect = 1e-46 Identities = 1134/1801 (63%), Gaps = 45/1801 (2%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| |||||||| || || |||||||| || | ||||| || Sbjct 91006 CGCAGGTAGTACATGCCCGTCTTCAGTCCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 90947 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | || || || |||| || ||| | || || || ||||||||| Sbjct 90946 ATCTTGCCCATAGTCGGGTCTTTCATGTGGATGTTGAGCGACTGCGACTGGTCGATGAAG 90887 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773 ||||| || || ||||| | |||| | | || | |||||||| ||||| Sbjct 90886 GCGCCACGGTCGGCAGCCATTTG---CACAACGGTGCGCTGGGAGATTTCCCAAACAGTC 90830 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 |||| || ||| | || || || | ||| || || || || ||| | Sbjct 90829 TTGTACAGCGCCTTGACCTCGGTAGGAATGTTGGGGATGTTCTGAATAGA---ACCGTTC 90773 Query 113834 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 113890 | | | |||| | | ||||||| | | ||||| | || || | ||| |||| | Sbjct 90772 TCGGCAATGATGCGGTTCTTCATAGCGTCAGACCACAAGCCCATGTCGACGAGGTCCTTC 90713 Query 113891 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950 | ||| ||||| || ||||| || || ||| || | | | || || ||| Sbjct 90712 AAGAGCCAAGGGTTGACGACTTGGAACTCGCCAGCAAGGACACGACGCTGGTAAATGTTG 90653 Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGC 114010 | ||||| || || |||||||| |||||||||||||| || | |||| ||| || ||| Sbjct 90652 GAGGTGTAAGGTTCGAAGCACTCGTTGTTACCCAAGATCTGAGAGGTGCTGGCAGTCGGC 90593 Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCG 114070 ||||| || | ||| || ||| |||| ||| | | | | || | ||||| || | Sbjct 90592 ATGGGCGCGACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGCTCCTTCAGAGAA 90533 Query 114071 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130 |||||||| || | | | | | |||||| || |||||||||| || || Sbjct 90532 TCCCAGTCCCAGAGATCCGAGGGTTTGACATTCCACATGTCGTACTGGAGGATGCCCTGA 90473 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 114190 || | || || |||||| | |||| || |||||||| ||| ||||| | || | Sbjct 90472 GAAACAGGGGAACCCTCATACGTCTGATAGGGGCCCTCCTCCTTGGCCAACT--GAACCG 90415 Query 114191 GCCTCG--AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCT 114248 | | | ||||| ||||| || |||||||| || || || | | || | Sbjct 90414 ACATGGTAAGGGCAGCGTGGTAGATTGTCTCGAAGATCTTCTTGTTGAGGTCACGAGCTT 90355 Query 114249 CGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 114308 || ||| || || | | ||| | || |||| || ||||| || ||||||| Sbjct 90354 CGGGGGACTCGAAGGGCATGCGGAGGGCCAAGAAGGCATCGGCAAGACCCTGAACACCGA 90295 Query 114309 GGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCC 114368 | ||||| ||||| || | ||| || || ||||| || || || || || Sbjct 90294 GACCAATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGGACCGGGTAGTGGTTGA 90235 Query 114369 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 114428 |||||| | || || || || ||| |||| |||| || |||||||| | | Sbjct 90234 CATCGATGATTCTGTTGAGGTTGCGAACGACGACCTGGGTGACCTCGTGAAGCTTCTGGA 90175 Query 114429 AATCA-AAACTGCGAGTCTCTTCATTGACAT---ACTTAGGAAGGGCGATTGACGCCAGA 114484 | || |||| | ||| | | | || | | || || || | || ||||| Sbjct 90174 AGTCGTAAACACC----CTCGTTGTAGTCAACGAAGGTGGGCAGCGCAAGCGAGGCCAGG 90119 Query 114485 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 114544 || ||||| | | |||||| | | |||||| || || || || || | || || Sbjct 90118 TTGCACACTGCGACCTCATCAGGAGCGCAGTACTCAATGATCTCAGTGCATAGGTTGGAG 90059 Query 114545 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGC 114604 | ||||| |||| |||||| || || ||| ||| ||||||||||| ||| Sbjct 90058 TTACGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGC 89999 Query 114605 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCT 114664 || | || | || ||||| ||||| | || ||| || || | ||||| || | Sbjct 89998 ATAAAGGGGTTACCAGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGA-----GCTTTT 89944 Query 114665 GGCACAGTGGCGT-TGGC-----TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCA 114718 || | | | || | || | |||| || | ||||||||| ||| ||||| || Sbjct 89943 GGGCCTTTAGGGTCTTGCGACCTTTGCCCATC-TGCTCGTACTTCTCGTACAGGGCCTCG 89885 Query 114719 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCAT 114778 || || || || | || | ||| || || || | ||||| | ||||| ||| Sbjct 89884 AATTCCTCGCCGTAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATGAGAGTCCAG 89825 Query 114779 TGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAG-AG 114837 | || || ||| || | |||||||||||| || ||||||||||| || ||||| || Sbjct 89824 TCGCCGTTCTTCTCCACTCTCTTCATGAAGAGATCGGGGATCCAGAGGGC-GAGAAATAG 89766 Query 114838 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 114897 || ||| ||| | || || | ||| || || |||| ||||| ||||| | | Sbjct 89765 GTCACGAGCGCGGACCTCCTCCTTCCCATGGTTCTTGCGCAGATCCAAGAAGTCAAATAC 89706 Query 114898 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA---CCAGCCTG 114954 ||| |||||||| || || ||||| | || | | || || || |||| Sbjct 89705 ATCAGCGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTTCCGCCCTG 89646 Query 114955 GTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTG 115014 || || || | || ||| || || || || ||||| |||| || || | ||| Sbjct 89645 GTCGACGTAGCGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGACGCCGTTAGAGGT 89586 Query 115015 GCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAAT 115074 ||| || || || ||| ||| | || | || |||| || | |||||| Sbjct 89585 GCCGTTGGTGCCAGCAATGTAAGAGCCGGTAGCGCGGATGCGGTGGACGTTGAGACCAAT 89526 Query 115075 ACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGAT 115134 || || ||| ||| ||||| || || | |||| || ||||||| || ||||| Sbjct 89525 GCCACCAGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTGTCGTAGATACCCTCGAT 89466 Query 115135 CGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGC 115194 ||||| |||| | ||| |||||| || |||| || | | || ||||| || Sbjct 89465 AGAGTCCTCCTTCATATCGACAAGGAAACAAGAGGACAGCTGCGCCTGGGGGGTACCGGC 89406 Query 115195 GTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTC 115252 ||||||||| || || | |||||| ||| | | |||| |||||| | ||||||| Sbjct 89405 GTTGAAGAGTGTGGGAGAGGCGTGGGTGA--AGAACTTGCTCGACATCAGGTTGTAGGTC 89348 Query 115253 TCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTAT 115312 || | ||| || || || || || |||| | || ||||| | ||||| Sbjct 89347 TCGATAACGCGCTCAACGTTGTCGCCCCAGATTCCGACAGCAACACGCATGATCATGTGC 89288 Query 115313 TGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTG 115372 |||||| | || | | || || ||| || |||||||| |||||||||||||| Sbjct 89287 TGGGGTCTCTCGGCAATCTTGCCGTCAAGCTTCAGGAGGTAAGATCTCTCCAAGGTCTTG 89228 Query 115373 A 115373 | Sbjct 89227 A 89227 >seq3337 Length=46210 Score = 118 bits (130), Expect = 1e-21 Identities = 340/519 (66%), Gaps = 12/519 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| ||| ||| | ||| |||||||| Sbjct 4099 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCAT 4158 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 125877 || || || ||||| || || | | || |||| | |||||||| Sbjct 4159 GAAGTCGAAGGGGTTGGAAGACTTGTAGACCTTTTCGTTGCCAAGCGCAACAAGGAGACG 4218 Query 125878 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 125937 || | ||| |||||||||||| |||| | |||||||| |||| ||| || Sbjct 4219 GTCGGCAACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGGGCGCA 4278 Query 125938 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTG 125997 || || || ||| | |||| ||| |||||| | || || || | |||| | | Sbjct 4279 AGGAAGAGCCTCCGTCAGGAACTCCTGCTCAATCTTGACAGCATCGACAATGATGTCCTC 4338 Query 125998 AATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 126054 || | | | || | | ||| | | | ||||| || ||| || || Sbjct 4339 GATAACCTGCTTGCTGGGGCGGTTCTTGAGGTGGGAATACAAGAGA--CA-GGCGAAGTC 4395 Query 126055 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAG 126114 ||| |||||||||||||| |||||||| || || |||||| ||| || |||||||| Sbjct 4396 GGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCCGGCATGAG 4455 Query 126115 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||||||| | |||||| || | || | ||| |||||||| ||||| || Sbjct 4456 ACCACGCTTCTTGAGCCAGAAGATGGATGCGAAGGCACCACTAAAGAAGATGCCCTCGAC 4515 Query 126175 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTT 126231 || || |||| || |||| || |||||| ||||| || || |||||| Sbjct 4516 GGCAGCAAAGGCAACCAGGCGCTGGGCGAAGGAG---GACTTCTCATCGCTAATCCACTT 4572 Query 126232 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGT 126270 | ||||| | ||||| || || || ||||| || Sbjct 4573 GAGGGCCCAGTCGGCCTTCTTGCGAATGCAAGGGACTGT 4611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597321059162640