Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq245 201 1e-46
seq3337 118 1e-21
>seq245
Length=98725
Score = 201 bits (222), Expect = 1e-46
Identities = 1134/1801 (63%), Gaps = 45/1801 (2%)
Strand=Plus/Minus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|| ||||||||||| |||||||| || || |||||||| || | ||||| ||
Sbjct 91006 CGCAGGTAGTACATGCCCGTCTTCAGTCCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 90947
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716
| |||| | || || || |||| || ||| | || || || |||||||||
Sbjct 90946 ATCTTGCCCATAGTCGGGTCTTTCATGTGGATGTTGAGCGACTGCGACTGGTCGATGAAG 90887
Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773
||||| || || ||||| | |||| | | || | |||||||| |||||
Sbjct 90886 GCGCCACGGTCGGCAGCCATTTG---CACAACGGTGCGCTGGGAGATTTCCCAAACAGTC 90830
Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833
|||| || ||| | || || || | ||| || || || || ||| |
Sbjct 90829 TTGTACAGCGCCTTGACCTCGGTAGGAATGTTGGGGATGTTCTGAATAGA---ACCGTTC 90773
Query 113834 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 113890
| | | |||| | | ||||||| | | ||||| | || || | ||| |||| |
Sbjct 90772 TCGGCAATGATGCGGTTCTTCATAGCGTCAGACCACAAGCCCATGTCGACGAGGTCCTTC 90713
Query 113891 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950
| ||| ||||| || ||||| || || ||| || | | | || || |||
Sbjct 90712 AAGAGCCAAGGGTTGACGACTTGGAACTCGCCAGCAAGGACACGACGCTGGTAAATGTTG 90653
Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGC 114010
| ||||| || || |||||||| |||||||||||||| || | |||| ||| || |||
Sbjct 90652 GAGGTGTAAGGTTCGAAGCACTCGTTGTTACCCAAGATCTGAGAGGTGCTGGCAGTCGGC 90593
Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCG 114070
||||| || | ||| || ||| |||| ||| | | | | || | ||||| || |
Sbjct 90592 ATGGGCGCGACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGCTCCTTCAGAGAA 90533
Query 114071 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130
|||||||| || | | | | | |||||| || |||||||||| || ||
Sbjct 90532 TCCCAGTCCCAGAGATCCGAGGGTTTGACATTCCACATGTCGTACTGGAGGATGCCCTGA 90473
Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 114190
|| | || || |||||| | |||| || |||||||| ||| ||||| | || |
Sbjct 90472 GAAACAGGGGAACCCTCATACGTCTGATAGGGGCCCTCCTCCTTGGCCAACT--GAACCG 90415
Query 114191 GCCTCG--AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCT 114248
| | | ||||| ||||| || |||||||| || || || | | || |
Sbjct 90414 ACATGGTAAGGGCAGCGTGGTAGATTGTCTCGAAGATCTTCTTGTTGAGGTCACGAGCTT 90355
Query 114249 CGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 114308
|| ||| || || | | ||| | || |||| || ||||| || |||||||
Sbjct 90354 CGGGGGACTCGAAGGGCATGCGGAGGGCCAAGAAGGCATCGGCAAGACCCTGAACACCGA 90295
Query 114309 GGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCC 114368
| ||||| ||||| || | ||| || || ||||| || || || || ||
Sbjct 90294 GACCAATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGGACCGGGTAGTGGTTGA 90235
Query 114369 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 114428
|||||| | || || || || ||| |||| |||| || |||||||| | |
Sbjct 90234 CATCGATGATTCTGTTGAGGTTGCGAACGACGACCTGGGTGACCTCGTGAAGCTTCTGGA 90175
Query 114429 AATCA-AAACTGCGAGTCTCTTCATTGACAT---ACTTAGGAAGGGCGATTGACGCCAGA 114484
| || |||| | ||| | | | || | | || || || | || |||||
Sbjct 90174 AGTCGTAAACACC----CTCGTTGTAGTCAACGAAGGTGGGCAGCGCAAGCGAGGCCAGG 90119
Query 114485 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 114544
|| ||||| | | |||||| | | |||||| || || || || || | || ||
Sbjct 90118 TTGCACACTGCGACCTCATCAGGAGCGCAGTACTCAATGATCTCAGTGCATAGGTTGGAG 90059
Query 114545 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGC 114604
| ||||| |||| |||||| || || ||| ||| ||||||||||| |||
Sbjct 90058 TTACGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGC 89999
Query 114605 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCT 114664
|| | || | || ||||| ||||| | || ||| || || | ||||| || |
Sbjct 89998 ATAAAGGGGTTACCAGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGA-----GCTTTT 89944
Query 114665 GGCACAGTGGCGT-TGGC-----TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCA 114718
|| | | | || | || | |||| || | ||||||||| ||| ||||| ||
Sbjct 89943 GGGCCTTTAGGGTCTTGCGACCTTTGCCCATC-TGCTCGTACTTCTCGTACAGGGCCTCG 89885
Query 114719 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCAT 114778
|| || || || | || | ||| || || || | ||||| | ||||| |||
Sbjct 89884 AATTCCTCGCCGTAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATGAGAGTCCAG 89825
Query 114779 TGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAG-AG 114837
| || || ||| || | |||||||||||| || ||||||||||| || ||||| ||
Sbjct 89824 TCGCCGTTCTTCTCCACTCTCTTCATGAAGAGATCGGGGATCCAGAGGGC-GAGAAATAG 89766
Query 114838 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 114897
|| ||| ||| | || || | ||| || || |||| ||||| ||||| | |
Sbjct 89765 GTCACGAGCGCGGACCTCCTCCTTCCCATGGTTCTTGCGCAGATCCAAGAAGTCAAATAC 89706
Query 114898 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA---CCAGCCTG 114954
||| |||||||| || || ||||| | || | | || || || ||||
Sbjct 89705 ATCAGCGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTTCCGCCCTG 89646
Query 114955 GTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTG 115014
|| || || | || ||| || || || || ||||| |||| || || | |||
Sbjct 89645 GTCGACGTAGCGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGACGCCGTTAGAGGT 89586
Query 115015 GCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAAT 115074
||| || || || ||| ||| | || | || |||| || | ||||||
Sbjct 89585 GCCGTTGGTGCCAGCAATGTAAGAGCCGGTAGCGCGGATGCGGTGGACGTTGAGACCAAT 89526
Query 115075 ACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGAT 115134
|| || ||| ||| ||||| || || | |||| || ||||||| || |||||
Sbjct 89525 GCCACCAGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTGTCGTAGATACCCTCGAT 89466
Query 115135 CGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGC 115194
||||| |||| | ||| |||||| || |||| || | | || ||||| ||
Sbjct 89465 AGAGTCCTCCTTCATATCGACAAGGAAACAAGAGGACAGCTGCGCCTGGGGGGTACCGGC 89406
Query 115195 GTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTC 115252
||||||||| || || | |||||| ||| | | |||| |||||| | |||||||
Sbjct 89405 GTTGAAGAGTGTGGGAGAGGCGTGGGTGA--AGAACTTGCTCGACATCAGGTTGTAGGTC 89348
Query 115253 TCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTAT 115312
|| | ||| || || || || || |||| | || ||||| | |||||
Sbjct 89347 TCGATAACGCGCTCAACGTTGTCGCCCCAGATTCCGACAGCAACACGCATGATCATGTGC 89288
Query 115313 TGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTG 115372
|||||| | || | | || || ||| || |||||||| ||||||||||||||
Sbjct 89287 TGGGGTCTCTCGGCAATCTTGCCGTCAAGCTTCAGGAGGTAAGATCTCTCCAAGGTCTTG 89228
Query 115373 A 115373
|
Sbjct 89227 A 89227
>seq3337
Length=46210
Score = 118 bits (130), Expect = 1e-21
Identities = 340/519 (66%), Gaps = 12/519 (2%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| |||| ||||||||||||||||| ||||| ||| ||| | ||| ||||||||
Sbjct 4099 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCAT 4158
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 125877
|| || || ||||| || || | | || |||| | ||||||||
Sbjct 4159 GAAGTCGAAGGGGTTGGAAGACTTGTAGACCTTTTCGTTGCCAAGCGCAACAAGGAGACG 4218
Query 125878 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 125937
|| | ||| |||||||||||| |||| | |||||||| |||| ||| ||
Sbjct 4219 GTCGGCAACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGGGCGCA 4278
Query 125938 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTG 125997
|| || || ||| | |||| ||| |||||| | || || || | |||| | |
Sbjct 4279 AGGAAGAGCCTCCGTCAGGAACTCCTGCTCAATCTTGACAGCATCGACAATGATGTCCTC 4338
Query 125998 AATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 126054
|| | | | || | | ||| | | | ||||| || ||| || ||
Sbjct 4339 GATAACCTGCTTGCTGGGGCGGTTCTTGAGGTGGGAATACAAGAGA--CA-GGCGAAGTC 4395
Query 126055 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAG 126114
||| |||||||||||||| |||||||| || || |||||| ||| || ||||||||
Sbjct 4396 GGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCCGGCATGAG 4455
Query 126115 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174
||| |||||||| | |||||| || | || | ||| |||||||| ||||| ||
Sbjct 4456 ACCACGCTTCTTGAGCCAGAAGATGGATGCGAAGGCACCACTAAAGAAGATGCCCTCGAC 4515
Query 126175 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTT 126231
|| || |||| || |||| || |||||| ||||| || || ||||||
Sbjct 4516 GGCAGCAAAGGCAACCAGGCGCTGGGCGAAGGAG---GACTTCTCATCGCTAATCCACTT 4572
Query 126232 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGT 126270
| ||||| | ||||| || || || ||||| ||
Sbjct 4573 GAGGGCCCAGTCGGCCTTCTTGCGAATGCAAGGGACTGT 4611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597321059162640
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