Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq245 295 7e-75
>seq245
Length=98725
Score = 295 bits (326), Expect = 7e-75
Identities = 1075/1668 (64%), Gaps = 30/1668 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| || |||||| || |||||||| ||| | || |||
Sbjct 89208 AACTACCAATACTTCGGCTTCAAGACCTTGGAGAGATCTTACCTCCTGAAGCTTGACGGC 89267
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||| |||| || || || | ||||| || || |||| || ||| ||
Sbjct 89268 AAGATTGCCGAGAGACCCCAGCACATGATCATGCGTGTTGCTGTCGGAATCTGGGGCGAC 89327
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|| | | ||| | | | | || ||| | |||| | ||| |||
Sbjct 89328 AACGTTGAGCGCGTTATCGAGACCTACAACCTGATGTCGAGCAAGTTCTTCACCCACGCC 89387
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954
| || || || |||||||| || ||||| | | ||| |||| || |||||||| ||
Sbjct 89388 TCTCCCACACTCTTCAACGCCGGTACCCCCCAGGCGCAGCTGTCCTCTTGTTTCCT--TG 89445
Query 93955 ACGAAC--AAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
||| |||| ||||| ||| || || | ||||| ||||||| |||||| | |
Sbjct 89446 TCGATATGAAGGAGGACTCTATCGAGGGTATCTACGACACCCTCAAGACCTGTGCTATGA 89505
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
|||| || || || || || || ||| |||||| | | || || | || || |
Sbjct 89506 TCTCCAAGATGGCTGGTGGCATTGGTCTCAACGTCCACCGCATCCGCGCTACCGGCTCTT 89565
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
|||| || ||||| |||||||| |||||| |||| || |||||||| ||||||||||
Sbjct 89566 ACATTGCTGGCACCAACGGCACCTCTAACGGCGTCGTTCCCATGCTCCGTGTCTTCAACA 89625
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || |||||||| |||||||| || | | | ||| |||| || |||| |
Sbjct 89626 ACACTGCCCGCTACGTCGACCAGGGCGGAAACAAGCGCCCCGGTGCTTTTGCCATCTACC 89685
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
||||||| |||||||| || || | ||| | || ||||| |||||||| || || |
Sbjct 89686 TCGAGCCTTGGCACGCTGATGTATTTGACTTCTTGGATCTGCGCAAGAACCATGGGAAGG 89745
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| || | || | ||||| || ||| |||||| | || || || || |||||
Sbjct 89746 AGGAGGTCCGCGCTCGTGACCTATTTCTCGCCCTCTGGATCCCCGATCTCTTCATGAAGA 89805
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| || ||||| ||| || ||||| ||| | || ||||| || || || || || |||
Sbjct 89806 GAGTGGAGAAGAACGGCGACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGTCTCGCCG 89865
Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432
|| | || | || || | | |||| | ||||| | |||||| |
Sbjct 89866 ACTGCTACGGCGAGGAATTCGAGGCCCTGTACGAGAAGTACGAGCAGATGGGCAAAGGTC 89925
Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492
| ||| | | || ||||| ||| || ||| | || | || ||||| |
Sbjct 89926 GCAAGACCCTAAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACTG 89985
Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
||| |||| || | | |||||| ||| |||| |||| ||||||| || |||| |
Sbjct 89986 GTAACCCCTTTATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTGG 90045
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612
| ||| | ||| || || ||||| ||||| | ||||| |||| || |||
Sbjct 90046 GTACCATCCGTAACTCCAACCTATGCACTGAGATCATTGAGTACTGCGCTCCTGATGAGG 90105
Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT 94672
| || ||||| ||||||| ||| | ||| |||| ||||| || |||||
Sbjct 90106 TCGCAGTGTGCAACCTGGCCTCGCTTGCGCTGCCCACCTTCGT------TGACTACA--A 90157
Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT---GA 94729
| | | | | ||| | || ||||| | || | ||| | ||| | |
Sbjct 90158 CGA-GGGTGTTTACGACTTCCAGAAGCTTCACGAGGTCAC--CCAGG-TCGTCGTTCGCA 90213
Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789
|||| ||||| | ||||| ||| |||||| |||| |||||| ||| |||
Sbjct 90214 ACCTCAACAGAATCATCGATGTCAACCACTACCCGGTCCAGGAGGCTCGCAACAGCAACA 90273
Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849
|| || || ||||| || |||| || |||||| | || || || | || | |
Sbjct 90274 TGCGCCACCGCCCCATTGGTCTCGGTGTTCAGGGTCTTGCCGATGCCTTCTTGGCCCTCC 90333
Query 94850 GTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTT 94909
| |||||| ||| || ||| || | | || ||| || ||||| | || |
Sbjct 90334 GCATGCCCTTCGAGTCCCCCGAAGCTCGTGACCTCAACAAGAAGATCTTCGAGACAATCT 90393
Query 94910 ATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC-ACGAA 94968
| ||| ||| | | || || || ||||||| ||| || ||||| | | |
Sbjct 90394 ACCACGCTGCCCTTACCATGTCGGTTCAGTTGGCCA---AGGA-GGAGGGCCCCTATCAG 90449
Query 94969 TCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAG 95028
||| || || || | |||||||| | |||| |||| | ||| ||| ||
Sbjct 90450 ACGTATGAGGGTTCCCCTGTTTCTCAGGGCATCCTCCAGTACGACATGTGGAATGTCAAA 90509
Query 95029 CCCTCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTATCAAACACGGTGTGA 95086
||||||| ||| | |||||||| |||| | | || || | | | ||||||||
Sbjct 90510 CCCTCGGATCTCTGGGACTGGGATTCTCTGAAGGAGCAGA--TCAAGCAGCACGGTGTCC 90567
Query 95087 AAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACA 95146
||| | ||||| || || |||||||| || ||| ||| | |||||| | || ||||
Sbjct 90568 GCAACTCTCTGCTCGTCGCGCCCATGCCGACTGCCAGCACCTCTCAGATCTTGGGTAACA 90627
Query 95147 ACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAAT 95206
|||||| |||||||| | |||||||||| | ||| | | || || || || || || |
Sbjct 90628 ACGAGTGCTTCGAACCTTACACCTCCAACATTTACCAGCGTCGTGTCCTTGCTGGCGAGT 90687
Query 95207 TCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGAC 95265
||| ||| ||||| ||| | |||||| | || | |||| ||||| ||||
Sbjct 90688 TCCAAGTCGTCAACCCTTGGCTCTTGAAGGACCTCGTCGAC-ATGGGCTTGTGGTCTGAC 90746
Query 95266 AAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCG 95325
| ||||||| | | || ||||| || | ||||||||||| | || ||
Sbjct 90747 GCTATGAAGAACCGCATCATTGCCGAGAACGGTTCTATTCAGAACATCCCCAACATTCCT 90806
Query 95326 GAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
|| |||||||||| |||||||| || ||||| ||| | ||||||
Sbjct 90807 ACCGAGGTCAAGGCGCTGTACAAGACTGTTTGGGAAATCTCCCAGCGC 90854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494696249953680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |