Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq245 183 3e-41
seq1916 104 2e-17
seq3878 100 3e-16
>seq245
Length=98725
Score = 183 bits (202), Expect = 3e-41
Identities = 966/1522 (63%), Gaps = 63/1522 (4%)
Strand=Plus/Minus
Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087
||||||| ||||| |||||||| || | || || | | || | ||| ||| |||
Sbjct 90702 GGTTGACGACTTGGAACTCGCCAGCAAGGACACGACGCTGGTAAATGTTGGAGGTGTAAG 90643
Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147
|||| ||| | ||||| || || | || |||| ||| | || ||||||||| ||| |
Sbjct 90642 GTTCGAAGCACTCGTTGTTACCCAAGATCTGAGAGGTGCTGGCAGTCGGCATGGGCGCGA 90583
Query 153148 CCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206
| | || ||| || || | |||||| ||| || | | ||||||| | | ||| |||
Sbjct 90582 CGAGCAGAGAGTTGCGGACACCGTGCTGCTTGA-TCTGCTCCTTCAGAGAATCCCAGTCC 90524
Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266
|| || |||| ||| | | ||||||||||||||||| | | || || | ||
Sbjct 90523 CAGAGATCCGAGGGTTTGACATTCCACATGTCGTACTGGAGGATGCCCTGAGAAACAGGG 90464
Query 153267 CTGCCGGCAAACGTACTG-TAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCG-- 153323
|| || |||| ||| ||| ||| || | ||||| | | | | | | | |
Sbjct 90463 GAACCCTCATACGT-CTGATAGGGGCCCTCCTCCTTGGCCAACT-GAACCGA-CATGGTA 90407
Query 153324 AGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTC 153383
|| || | | ||| || || ||| ||| | || ||||| | ||||| | |
Sbjct 90406 AGGGCAGCGTGGTAGATTGTCTCGAAGATCTTCTTGTTGAGGTCACGAGCTTCGGGGGAC 90347
Query 153384 TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443
||| | |||||||| || || ||||| ||||| |||||||| | ||||| || |||
Sbjct 90346 TCGAAGGGCATGCGGAGGGCCAAGAAGGCATCGGCAAGACCCTGAACACCGAGACCAATG 90287
Query 153444 GGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT--ATGGGATAGTGATTGCGATCGA 153501
|| || || | ||||||| | || ||| || | || ||||| ||| |||||
Sbjct 90286 GGGCGGTGGCGCATGTTGCTGTTGCGAGC-CTC-CTGGACCGGGTAGTGGTTGACATCGA 90229
Query 153502 TAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561
| ||| ||||||||||||| || || || | || | | | | ||| |||| ||| || |
Sbjct 90228 TGATTCTGTTGAGGTTGCGAACGACGACCTGGGTGACCTCGTGAAGCTTCTGGAAGTCGT 90169
Query 153562 AGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGG 153621
| |||| | | ||| | || |||| || ||||| || || || |
Sbjct 90168 AAACACCCTCGTTGTAGTCAACGAAGGTGGGCAGCGCAAGCGAGGCCAGGTTGCACACTG 90109
Query 153622 CCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGA 153681
| ||| || | ||| ||||| | |||||| | ||| |||||| | |||
Sbjct 90108 CGACCTCATCAGGAGCGCAGTACTCAATGATCTCAGTGCATAGGTTGGAGTTACGGATGG 90049
Query 153682 CGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTC 153741
|||| || | ||| ||||| ||||| ||| || || ||| ||||||| | ||
Sbjct 90048 TACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATAAAGGGGT 89989
Query 153742 CGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCA---GGTCCT----GCGCT 153791
|| |||||| ||| | |||| ||| | ||| || || ||| | ||
Sbjct 89988 TACCAGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTTTGGGCCTTTAGGGTCT 89929
Query 153792 CGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCG 153851
|| || |||| || || |||||| ||||||||| ||| || ||
Sbjct 89928 TGCGACCTTTGCCCAT-------CTG---CTCGTACTTCTCGTACAGGGCCTCGAATTCC 89879
Query 153852 TCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCG 153911
|||||||||||||||||||| || || |||| | || ||||| || | ||| |
Sbjct 89878 TCGCCGTAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATGAGAGTCCA------G 89825
Query 153912 TCGGCGTTG------ACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGG 153965
||| |||| || | |||||| ||||| || | |||||| ||| | |||
Sbjct 89824 TCGCCGTTCTTCTCCACTCTCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGAAATAGG 89765
Query 153966 TCGCGCGCCTTGCAATCCTCCGCGCCCATG----TTGCGTTTCAGATTGAGCACGCTATA 154021
|| || || | |||||| |||||| ||||| ||||| | | | | |
Sbjct 89764 TCACGAGCGCGGACCTCCTCCTT-CCCATGGTTCTTGCG---CAGATCCAAGAAGTCAAA 89709
Query 154022 GATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTT---TCCGCC 154078
| || |||||||| || || | ||||| ||| | ||||| ||||| ||||||
Sbjct 89708 TACATCAGCGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTTCCGCC 89649
Query 154079 CTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGC 154138
||| ||||||| ||| | | ||||||||||| || | |||||| | | |||| | |
Sbjct 89648 CTGGTCGACGTAGCGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGACGCCGTTAGA 89589
Query 154139 GGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCC 154198
|||||||||||| | || | |||| ||||| | | || ||||| | ||
Sbjct 89588 GGTGCCGTTGGTGCCAGCAATGTAAGAGCCGGTAGCGCGGATGCGGTGGACGTTGAGACC 89529
Query 154199 AATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGT 154257
|||||| || ||| | ||| || || ||| ||| || || |||||| || |
Sbjct 89528 AATGCCACCAGCCAT-CTTGGAGATCATAGCACAGGTCTTGAGGGTGTCGTAGATACCCT 89470
Query 154258 CGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTC 154317
|||| || || | ||| | |||||| || ||| |||| | | || |
Sbjct 89469 CGATAGAGTCCTCCTTCATATCGACAAGGAAACAAGAGGACAGCTGCGCCTGGGGGGTAC 89410
Query 154318 CCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCT---CATCATGCGGT 154374
| || ||||| |||||| ||||| || || | || ||| ||||| | ||
Sbjct 89409 CGGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGAAGAACTT---GCTCGACATCAGGTTGT 89353
Query 154375 ACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434
| || ||||| || || | | ||||| || |||| || || ||||||| ||
Sbjct 89352 AGGTCTCGATAACGCGCTCAACGTTGTCGCCCCAGATTCCGACAGCAACACGCATGATCA 89293
Query 154435 TGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGG 154494
||||||| || | ||||| | | ||||| ||||| ||| || | || | ||
Sbjct 89292 TGTGCTGGGGTCTCTCGGCAATCTTGCCGTCAAGCTTCAGGAGGTAAGATCTCTCCAAGG 89233
Query 154495 TTTTGTAACCGAAATACTTGTA 154516
| ||| | ||||| || | |||
Sbjct 89232 TCTTGAAGCCGAAGTATTGGTA 89211
>seq1916
Length=1946
Score = 104 bits (114), Expect = 2e-17
Identities = 142/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || || ||||||||| || || ||||
Sbjct 1169 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCG 1228
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| || ||||| ||||| || || || || || ||||| ||| || || | |
Sbjct 1229 AAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACA 1288
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||||| |||||||||||| | || | || || || || || || ||
Sbjct 1289 TTG-TCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTT 1347
Query 138600 TACAAAAATCTGCATG 138615
|| || |||||||||
Sbjct 1348 GACGAAGATCTGCATG 1363
>seq3878
Length=33396
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||| || |||||||||||| || |||||| |||||||| || || |||| |
Sbjct 29327 GATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCCTCGAGCTGCTTGCCGGCA 29268
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| || || || ||||| ||||| || || || ||||| ||| | || | || |
Sbjct 29267 AAGATCAGGCGTTGCTGGTCGGGAGGGATGCCCTCCTTGTC-CTGAATCTTCGACTTGAC 29209
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | |||||| | || || ||||| | ||| | ||| || ||||| || || |
Sbjct 29208 GTTG-TCAATGGTGTCTGATGATTCAACCTCAAGCGTGATCGTCTTTCCAGTAAGCGTCT 29150
Query 138599 TTACAAAAATCTGCAT 138614
| || || ||||||||
Sbjct 29149 TGACGAAGATCTGCAT 29134
Score = 89.7 bits (98), Expect = 5e-13
Identities = 131/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||| || |||||||||||| || |||||| |||||||| || || || | |
Sbjct 29099 GATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCA 29040
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| | || || ||||| ||||| || || || ||||| ||| || || | |
Sbjct 29039 AAGATCAAGCGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACA 28980
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||||| ||||| ||||||| || | || || ||||| ||||| ||
Sbjct 28979 TTG-TCGATGGTGTCGGAGGACTCTACCTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTT 28921
Query 138600 TAC 138602
||
Sbjct 28920 GAC 28918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496235366105760
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