Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq245 183 3e-41 seq1916 104 2e-17 seq3878 100 3e-16 >seq245 Length=98725 Score = 183 bits (202), Expect = 3e-41 Identities = 966/1522 (63%), Gaps = 63/1522 (4%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| ||||| |||||||| || | || || | | || | ||| ||| ||| Sbjct 90702 GGTTGACGACTTGGAACTCGCCAGCAAGGACACGACGCTGGTAAATGTTGGAGGTGTAAG 90643 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 |||| ||| | ||||| || || | || |||| ||| | || ||||||||| ||| | Sbjct 90642 GTTCGAAGCACTCGTTGTTACCCAAGATCTGAGAGGTGCTGGCAGTCGGCATGGGCGCGA 90583 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 | | || ||| || || | |||||| ||| || | | ||||||| | | ||| ||| Sbjct 90582 CGAGCAGAGAGTTGCGGACACCGTGCTGCTTGA-TCTGCTCCTTCAGAGAATCCCAGTCC 90524 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 || || |||| ||| | | ||||||||||||||||| | | || || | || Sbjct 90523 CAGAGATCCGAGGGTTTGACATTCCACATGTCGTACTGGAGGATGCCCTGAGAAACAGGG 90464 Query 153267 CTGCCGGCAAACGTACTG-TAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCG-- 153323 || || |||| ||| ||| ||| || | ||||| | | | | | | | | Sbjct 90463 GAACCCTCATACGT-CTGATAGGGGCCCTCCTCCTTGGCCAACT-GAACCGA-CATGGTA 90407 Query 153324 AGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTC 153383 || || | | ||| || || ||| ||| | || ||||| | ||||| | | Sbjct 90406 AGGGCAGCGTGGTAGATTGTCTCGAAGATCTTCTTGTTGAGGTCACGAGCTTCGGGGGAC 90347 Query 153384 TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 ||| | |||||||| || || ||||| ||||| |||||||| | ||||| || ||| Sbjct 90346 TCGAAGGGCATGCGGAGGGCCAAGAAGGCATCGGCAAGACCCTGAACACCGAGACCAATG 90287 Query 153444 GGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT--ATGGGATAGTGATTGCGATCGA 153501 || || || | ||||||| | || ||| || | || ||||| ||| ||||| Sbjct 90286 GGGCGGTGGCGCATGTTGCTGTTGCGAGC-CTC-CTGGACCGGGTAGTGGTTGACATCGA 90229 Query 153502 TAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 | ||| ||||||||||||| || || || | || | | | | ||| |||| ||| || | Sbjct 90228 TGATTCTGTTGAGGTTGCGAACGACGACCTGGGTGACCTCGTGAAGCTTCTGGAAGTCGT 90169 Query 153562 AGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGG 153621 | |||| | | ||| | || |||| || ||||| || || || | Sbjct 90168 AAACACCCTCGTTGTAGTCAACGAAGGTGGGCAGCGCAAGCGAGGCCAGGTTGCACACTG 90109 Query 153622 CCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGA 153681 | ||| || | ||| ||||| | |||||| | ||| |||||| | ||| Sbjct 90108 CGACCTCATCAGGAGCGCAGTACTCAATGATCTCAGTGCATAGGTTGGAGTTACGGATGG 90049 Query 153682 CGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTC 153741 |||| || | ||| ||||| ||||| ||| || || ||| ||||||| | || Sbjct 90048 TACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATAAAGGGGT 89989 Query 153742 CGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCA---GGTCCT----GCGCT 153791 || |||||| ||| | |||| ||| | ||| || || ||| | || Sbjct 89988 TACCAGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTTTGGGCCTTTAGGGTCT 89929 Query 153792 CGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCG 153851 || || |||| || || |||||| ||||||||| ||| || || Sbjct 89928 TGCGACCTTTGCCCAT-------CTG---CTCGTACTTCTCGTACAGGGCCTCGAATTCC 89879 Query 153852 TCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCG 153911 |||||||||||||||||||| || || |||| | || ||||| || | ||| | Sbjct 89878 TCGCCGTAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATGAGAGTCCA------G 89825 Query 153912 TCGGCGTTG------ACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGG 153965 ||| |||| || | |||||| ||||| || | |||||| ||| | ||| Sbjct 89824 TCGCCGTTCTTCTCCACTCTCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGAAATAGG 89765 Query 153966 TCGCGCGCCTTGCAATCCTCCGCGCCCATG----TTGCGTTTCAGATTGAGCACGCTATA 154021 || || || | |||||| |||||| ||||| ||||| | | | | | Sbjct 89764 TCACGAGCGCGGACCTCCTCCTT-CCCATGGTTCTTGCG---CAGATCCAAGAAGTCAAA 89709 Query 154022 GATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTT---TCCGCC 154078 | || |||||||| || || | ||||| ||| | ||||| ||||| |||||| Sbjct 89708 TACATCAGCGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTTCCGCC 89649 Query 154079 CTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGC 154138 ||| ||||||| ||| | | ||||||||||| || | |||||| | | |||| | | Sbjct 89648 CTGGTCGACGTAGCGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGACGCCGTTAGA 89589 Query 154139 GGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCC 154198 |||||||||||| | || | |||| ||||| | | || ||||| | || Sbjct 89588 GGTGCCGTTGGTGCCAGCAATGTAAGAGCCGGTAGCGCGGATGCGGTGGACGTTGAGACC 89529 Query 154199 AATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGT 154257 |||||| || ||| | ||| || || ||| ||| || || |||||| || | Sbjct 89528 AATGCCACCAGCCAT-CTTGGAGATCATAGCACAGGTCTTGAGGGTGTCGTAGATACCCT 89470 Query 154258 CGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTC 154317 |||| || || | ||| | |||||| || ||| |||| | | || | Sbjct 89469 CGATAGAGTCCTCCTTCATATCGACAAGGAAACAAGAGGACAGCTGCGCCTGGGGGGTAC 89410 Query 154318 CCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCT---CATCATGCGGT 154374 | || ||||| |||||| ||||| || || | || ||| ||||| | || Sbjct 89409 CGGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGAAGAACTT---GCTCGACATCAGGTTGT 89353 Query 154375 ACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434 | || ||||| || || | | ||||| || |||| || || ||||||| || Sbjct 89352 AGGTCTCGATAACGCGCTCAACGTTGTCGCCCCAGATTCCGACAGCAACACGCATGATCA 89293 Query 154435 TGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGG 154494 ||||||| || | ||||| | | ||||| ||||| ||| || | || | || Sbjct 89292 TGTGCTGGGGTCTCTCGGCAATCTTGCCGTCAAGCTTCAGGAGGTAAGATCTCTCCAAGG 89233 Query 154495 TTTTGTAACCGAAATACTTGTA 154516 | ||| | ||||| || | ||| Sbjct 89232 TCTTGAAGCCGAAGTATTGGTA 89211 >seq1916 Length=1946 Score = 104 bits (114), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || || ||||||||| || || |||| Sbjct 1169 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCG 1228 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| ||||| || || || || || ||||| ||| || || | | Sbjct 1229 AAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACA 1288 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| |||||||||||| | || | || || || || || || || Sbjct 1289 TTG-TCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTT 1347 Query 138600 TACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 1348 GACGAAGATCTGCATG 1363 >seq3878 Length=33396 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||| || |||||| |||||||| || || |||| | Sbjct 29327 GATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCCTCGAGCTGCTTGCCGGCA 29268 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || || || ||||| ||||| || || || ||||| ||| | || | || | Sbjct 29267 AAGATCAGGCGTTGCTGGTCGGGAGGGATGCCCTCCTTGTC-CTGAATCTTCGACTTGAC 29209 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||| | || || ||||| | ||| | ||| || ||||| || || | Sbjct 29208 GTTG-TCAATGGTGTCTGATGATTCAACCTCAAGCGTGATCGTCTTTCCAGTAAGCGTCT 29150 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 29149 TGACGAAGATCTGCAT 29134 Score = 89.7 bits (98), Expect = 5e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||| || |||||| |||||||| || || || | | Sbjct 29099 GATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCA 29040 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| | || || ||||| ||||| || || || ||||| ||| || || | | Sbjct 29039 AAGATCAAGCGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACA 28980 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| ||||| ||||||| || | || || ||||| ||||| || Sbjct 28979 TTG-TCGATGGTGTCGGAGGACTCTACCTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTT 28921 Query 138600 TAC 138602 || Sbjct 28920 GAC 28918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496235366105760