Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3878 84.2 2e-11 >seq3878 Length=33396 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || || || |||||||||||||| || | | |||| || | ||| Sbjct 29564 TGGAGAGTCGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTCCTCCAGTTGC 29505 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | |||| ||||| ||||| || || || |||||||| |||||| Sbjct 29504 TTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTTGGATTTTG 29445 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || | || ||||| || | || || || || ||||| || || || ||| Sbjct 29444 GACTTGACGTTGTCGATAGTGTCAGAAGACTCAACCTCCAACGTAATCGTCTTTCCGGTC 29385 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 | || || ||||| ||||||||| Sbjct 29384 AAGGTCTTGACAAAGATTTGCATA 29361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357373017794030