Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq245 87.8 2e-12 >seq245 Length=98725 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 124107 CAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAA 124166 ||||||||||||||||||| | ||| | || | ||||||||| | | || | Sbjct 90486 CAGTACGACATGTGGAATGTCAAACCCTCGGATCTCTGGGACTGGGATTCTCTGAAGGA- 90544 Query 124167 CGCATATC--GACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAA 124224 ||| ||| | ||||||| | || ||||| ||| | || ||| ||||||||| || | Sbjct 90545 -GCAGATCAAGCAGCACGGTGTCCGCAACTCTCTGCTCGTCGCGCCCATGCCGACTGCCA 90603 Query 124225 CCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACG 124284 ||| |||| || || || |||||||| | |||||| || | ||| ||| | ||| Sbjct 90604 GCACCTCTCAGATCTTGGGTAACAACGAGTGCTTCGAACCTTACACCTCCAACATTTACC 90663 Query 124285 TGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315 ||| || || | || ||||| || ||||| Sbjct 90664 AGCGTCGTGTCCTTGCTGGCGAGTTCCAAGT 90694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451978577125680