Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq245 87.8 2e-12
>seq245
Length=98725
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 124107 CAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAA 124166
||||||||||||||||||| | ||| | || | ||||||||| | | || |
Sbjct 90486 CAGTACGACATGTGGAATGTCAAACCCTCGGATCTCTGGGACTGGGATTCTCTGAAGGA- 90544
Query 124167 CGCATATC--GACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAA 124224
||| ||| | ||||||| | || ||||| ||| | || ||| ||||||||| || |
Sbjct 90545 -GCAGATCAAGCAGCACGGTGTCCGCAACTCTCTGCTCGTCGCGCCCATGCCGACTGCCA 90603
Query 124225 CCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACG 124284
||| |||| || || || |||||||| | |||||| || | ||| ||| | |||
Sbjct 90604 GCACCTCTCAGATCTTGGGTAACAACGAGTGCTTCGAACCTTACACCTCCAACATTTACC 90663
Query 124285 TGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315
||| || || | || ||||| || |||||
Sbjct 90664 AGCGTCGTGTCCTTGCTGGCGAGTTCCAAGT 90694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451978577125680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |