Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq245 214 2e-50
seq3337 131 2e-25
>seq245
Length=98725
Score = 214 bits (236), Expect = 2e-50
Identities = 1143/1806 (63%), Gaps = 55/1806 (3%)
Strand=Plus/Minus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|| ||||||||||| |||||||| || || |||||||| || | ||||| ||
Sbjct 91006 CGCAGGTAGTACATGCCCGTCTTCAGTCCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 90947
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677
| |||| | || || || |||| || ||| | || || || |||||||||
Sbjct 90946 ATCTTGCCCATAGTCGGGTCTTTCATGTGGATGTTGAGCGACTGCGACTGGTCGATGAAG 90887
Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 115734
|| || || || ||||| | |||| | | || | |||||||| |||||
Sbjct 90886 GCGCCACGGTCGGCAGCCATTTG---CACAACGGTGCGCTGGGAGATTTCCCAAACAGTC 90830
Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794
|||| || ||| | || || || | ||| || || ||||| ||| |
Sbjct 90829 TTGTACAGCGCCTTGACCTCGGTAGGAATGTTGGGGATGTTCTGAATAGA---ACCGTTC 90773
Query 115795 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCC 115851
| | | |||| | | ||||||| | | ||||| | || || | ||| |||| |
Sbjct 90772 TCGGCAATGATGCGGTTCTTCATAGCGTCAGACCACAAGCCCATGTCGACGAGGTCCTTC 90713
Query 115852 ACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTG 115911
| ||| ||||| || ||||| || || ||| || | | | || ||||||
Sbjct 90712 AAGAGCCAAGGGTTGACGACTTGGAACTCGCCAGCAAGGACACGACGCTGGTAAATGTTG 90653
Query 115912 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 115971
| ||||| || || |||||||| |||||||||||||| || | ||| ||| || |||
Sbjct 90652 GAGGTGTAAGGTTCGAAGCACTCGTTGTTACCCAAGATCTGAGAGGTGCTGGCAGTCGGC 90593
Query 115972 ATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCG 116031
||||| || | ||| || |||||||| ||| | | | || | ||||| || |
Sbjct 90592 ATGGGCGCGACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGCTCCTTCAGAGAA 90533
Query 116032 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGG 116091
|||||||| || | | | | | |||||| || |||||||||| || ||
Sbjct 90532 TCCCAGTCCCAGAGATCCGAGGGTTTGACATTCCACATGTCGTACTGGAGGATGCCCTGA 90473
Query 116092 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 116151
|| | || || |||||| | |||| ||| |||||||| ||| ||||| | || |
Sbjct 90472 GAAACAGGGGAACCCTCATACGTCTGATAGGGGCCCTCCTCCTTGGCCAA--CTGAACCG 90415
Query 116152 GCCTCG--AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCT 116209
| | | ||||| ||||| || |||||||| || || || | | || |
Sbjct 90414 ACATGGTAAGGGCAGCGTGGTAGATTGTCTCGAAGATCTTCTTGTTGAGGTCACGAGCTT 90355
Query 116210 CGTCGGAATCAAACGCGA----GACGGCACAAAATAAATACATCCGCGAGACCTTGGACA 116265
|| ||| || || | | || ||| ||| || |||| || ||||| || |||
Sbjct 90354 CGGGGGACTCGAAGGGCATGCGGAGGGC-CAA---GAAGGCATCGGCAAGACCCTGAACA 90299
Query 116266 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 116325
||||| ||||| ||||| || | ||| || || ||||| || || || ||
Sbjct 90298 CCGAGACCAATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGGACCGGGTAGTGG 90239
Query 116326 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 116385
|| |||||| | || || || || ||| |||| |||| || ||||||||
Sbjct 90238 TTGACATCGATGATTCTGTTGAGGTTGCGAACGACGACCTGGGTGACCTCGTGAAGCTTC 90179
Query 116386 TCGTAATC-AAAACTGCGAGTCTCTTCATTG---ACATACTTAGGAAGGGCGATTGACGC 116441
| | | || |||| | ||| | | | || | | || || || | || ||
Sbjct 90178 TGGAAGTCGTAAAC----ACCCTCGTTGTAGTCAACGAAGGTGGGCAGCGCAAGCGAGGC 90123
Query 116442 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATT 116501
||| || ||||| | | |||||| | | |||||| || || || || || | ||
Sbjct 90122 CAGGTTGCACACTGCGACCTCATCAGGAGCGCAGTACTCAATGATCTCAGTGCATAGGTT 90063
Query 116502 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTA 116561
|| | ||||| |||| |||||| || || ||| ||| |||||||||||
Sbjct 90062 GGAGTTACGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTA 90003
Query 116562 GAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGC 116621
||||||| | || | || ||||| ||||| | || ||| || || | ||| | ||
Sbjct 90002 GAGCATAAAGGGGTTACCAGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGA-----GC 89948
Query 116622 GGCTGGCACAGTGGCGT-TGGC-----TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGC 116675
||| | | | || | || | |||| | || ||||||||| ||| |||||
Sbjct 89947 TTTTGGGCCTTTAGGGTCTTGCGACCTTTGCCCAT-CTGCTCGTACTTCTCGTACAGGGC 89889
Query 116676 CTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAG 116734
||| || || || || ||| || | ||| || || || | || || | |||||
Sbjct 89888 CTCGAATTCCTC-GCCGTAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATGAGAG 89830
Query 116735 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAG- 116793
||| | || || ||| || | |||||||||||| || ||||||||||| | ||||
Sbjct 89829 TCCAGTCGCCGTTCTTCTCCACTCTCTTCATGAAGAGATCGGGGATCCAGAG-GGCGAGA 89771
Query 116794 AAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 116853
|| || || ||| ||| | || || | ||| || || |||| ||||| |||||
Sbjct 89770 AATAGGTCACGAGCGCGGACCTCCTCCTTCCCATGGTTCTTGCGCAGATCCAAGAAGTCA 89711
Query 116854 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCA 116910
| | ||| |||||||| || || ||||| | || | | || ||| ||
Sbjct 89710 AATACATCAGCGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTTCCG 89651
Query 116911 GCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCA 116970
|||||| || || | || || ||| || || || ||||| |||| || || | |
Sbjct 89650 CCCTGGTCGACGTAGCGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGACGCCGTTA 89591
Query 116971 GATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATA 117030
|| ||| || || || ||| ||| | | || | || ||||| || | |
Sbjct 89590 GAGGTGCCGTTGGTGCCAGCAATGTAAGAGCCGGTAGCGCGGATGCGGTGGACGTTGAGA 89531
Query 117031 CCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCA 117090
||||| || || ||| ||| ||||| || || | |||| || ||||||| ||
Sbjct 89530 CCAATGCCACCAGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTGTCGTAGATACCC 89471
Query 117091 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 117150
||||| ||||| |||| | ||| ||||| || |||| || | | || |||
Sbjct 89470 TCGATAGAGTCCTCCTTCATATCGACAAGGAAACAAGAGGACAGCTGCGCCTGGGGGGTA 89411
Query 117151 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGT 117208
|| ||||||||||| || || | |||||| ||| | | |||| |||||| | ||
Sbjct 89410 CCGGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGA--AGAACTTGCTCGACATCAGGTTGT 89353
Query 117209 AGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACA 117268
||||||| | || || || || || || |||| | || ||||| | ||
Sbjct 89352 AGGTCTCGATAACGCGCTCAACGTTGTCGCCCCAGATTCCGACAGCAACACGCATGATCA 89293
Query 117269 TGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGG 117328
||| |||||| | || | | || || ||| || |||||||| |||||||||
Sbjct 89292 TGTGCTGGGGTCTCTCGGCAATCTTGCCGTCAAGCTTCAGGAGGTAAGATCTCTCCAAGG 89233
Query 117329 TCTTGA 117334
||||||
Sbjct 89232 TCTTGA 89227
>seq3337
Length=46210
Score = 131 bits (144), Expect = 2e-25
Identities = 343/520 (66%), Gaps = 14/520 (3%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| | || ||||||||||||||||| ||||| || | ||| ||| ||||||||
Sbjct 4099 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCAT 4158
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 127350
|| || || ||||| || || | | || |||| | ||||||||
Sbjct 4159 GAAGTCGAAGGGGTTGGAAGACTTGTAGACCTTTTCGTTGCCAAGCGCAACAAGGAGACG 4218
Query 127351 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 127410
|| | ||| |||||||||||| |||| | |||||||| |||| ||| ||
Sbjct 4219 GTCGGCAACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGGGCGCA 4278
Query 127411 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTG 127470
|| || || ||| | |||| ||| |||||| | ||||| || | |||| | |
Sbjct 4279 AGGAAGAGCCTCCGTCAGGAACTCCTGCTCAATCTTGACAGCATCGACAATGATGTCCTC 4338
Query 127471 AATAGTGTCCACCCCAGGTC---TATTGCGTAAAGTCTTGAAGAGTTCCACAG-CAAACT 127526
||| | | | || | | ||| | | | ||||| |||| | || |
Sbjct 4339 GATAACCTGCTTGCTGGGGCGGTTCTTGAGGTGGGAATACAAGAG----ACAGGCGAAGT 4394
Query 127527 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 127586
| ||| |||||||||||||| |||||||| || || |||||| |||||| |||||||
Sbjct 4395 CGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCCGGCATGA 4454
Query 127587 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 127646
|||| |||||||| | |||||| || | || | ||| |||||||| ||||| |
Sbjct 4455 GACCACGCTTCTTGAGCCAGAAGATGGATGCGAAGGCACCACTAAAGAAGATGCCCTCGA 4514
Query 127647 CACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACT 127703
| || || |||| || |||| ||| ||||| |||||| ||| || |||||
Sbjct 4515 CGGCAGCAAAGGCAACCAGGCGCTGGGCGAAGGA---GGACTTCTCATCGCTAATCCACT 4571
Query 127704 TCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGT 127743
| | ||||| | ||||| || || || ||||| ||
Sbjct 4572 TGAGGGCCCAGTCGGCCTTCTTGCGAATGCAAGGGACTGT 4611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613473779195280
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