Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq245 167 4e-36
>seq245
Length=98725
Score = 167 bits (184), Expect = 4e-36
Identities = 421/620 (68%), Gaps = 19/620 (3%)
Strand=Plus/Minus
Query 203838 TCTTG-TCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACA 203894
||||| || || ||||||||||| |||| | | |||| ||||| | | ||| |||||||
Sbjct 91051 TCTTGGTCGACAGTGAACTGAATAGGCGCTG-CAGCAG-CCTGCGTGCGCAGGTAGTACA 90994
Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGT 203954
|||| ||||| || || || ||| || | ||||||| | | |||| ||
Sbjct 90993 TGCCCGTCTTCAGTCCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATAG 90934
Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013
| ||||| |||||| ||||| || ||||| ||||||||| |||||||| || ||
Sbjct 90933 TCGGGTCTTTCATGTGGATGTTGAGCGACTGCGACTGGTCGATG-AAGGCGCCACGGTCG 90875
Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCT 204072
|| ||||| | | || ||| ||| || || ||||| || |||||| ||| || || |
Sbjct 90874 GCAGCCATTTGCACAACGGTGCGCTGGGAGATTTCCCAAACAGTCTTGTACAGCGCCT-T 90816
Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA 204131
| | ||| | | | | || ||| || || ||||| ||||| || | |
Sbjct 90815 GACCTCGGTAGGAATGT-TGGGGATGTTCTGAATAGAACCGTTCTCGGCAATGATGCGGT 90757
Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191
|| || | | || ||||| ||||| || || ||| || || |||||||
Sbjct 90756 TCTTCATAGCGTCAGACCACAAGCCCATGTCGACGAGGTCCTTCAAGAGCCAAGGGTTGA 90697
Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251
|| || || || || | || || | || | | | |||| |||| | |||||||
Sbjct 90696 CGACTTGGAACTCGCCAGCAAGGACACGACGCTGGTAAATGTTGGAGGTGTAAGGTTCGA 90637
Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311
| ||||||||| || || ||||||| ||||||||| || |||||||| || | |||||
Sbjct 90636 AGCACTCGTTGTTACCCAAGATCTGAGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGCA 90577
Query 204312 GGGAGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGTC---GTGC 204367
| |||||||| ||||||| | | || |||| ||||||||| |||||| | |
Sbjct 90576 GAGAGTTGCGGACACCGTGCTGCTTGA-TCTGCTCCTTCAGAGAATCCCAGTCCCAGAG- 90519
Query 204368 ATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTG 204427
||| | |||||| || |||||||||| |||| | |||||| ||| || |||
Sbjct 90518 ATCCGA--GGGTTTGACATTCCACATGTCGTACTGGAGGATGCCCTGAGAAACAGGGGAA 90461
Query 204428 CCCTTGTACGTCGGATAAGG 204447
|||| |||||| |||| ||
Sbjct 90460 CCCTCATACGTCTGATAGGG 90441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795111883920480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |