Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq215 318 7e-82
seq2795 145 1e-29
>seq215
Length=41279
Score = 318 bits (352), Expect = 7e-82
Identities = 673/1000 (67%), Gaps = 7/1000 (1%)
Strand=Plus/Minus
Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081
|||||||| ||||| | || ||||| || || |||||||||||||| || | || ||
Sbjct 30720 ATGGCGGCCTGGACGGCGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTG 30661
Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141
| || || ||||| || || || || | | | || || ||||| || || ||
Sbjct 30660 GGCTCCTTGCCGTTGAAGTAGTCGGAGATGAGCTTCTGGATGCGGGGGATACGGGTGGAA 30601
Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201
|| ||||||| || || || | || | || || |||||||| | ||| ||
Sbjct 30600 CCTCCGACCAGGACAATCTCGTGGACCTGGGACTTGTCGATCTTGGCGTCGGTGAGGACG 30541
Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261
||||| || | || ||||||| |||| ||||| ||||| || || |||
Sbjct 30540 CGGTCGACGGGCTGGATGGTGGAGCGGAACAGGTCCTGGCACAGCTCCTCGAAGCGGGCA 30481
Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321
||||| ||||| || ||||| |||| ||| ||||| | ||| || || || |||| ||
Sbjct 30480 CGGGTGATGGAGGTGTAGAAGTCAATGCCCTCGTAGAGCGAGTCGATCTCGATGGAGGTC 30421
Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381
|| || | ||| || | || ||||| || ||||| || || || || | || || ||
Sbjct 30420 TGGGCAGACGAGGACAGGGTGCGCTTCGCACGCTCGCAGGCGGTGCGCAGGCGGCGCAGC 30361
Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTG 7440
|| || | ||| ||| | || ||||| || || || || ||||| || | | |||||
Sbjct 30360 GCGCGGGCGTTGGTGGACAGGTCCTTCTTGTGCTTGCGCTTGAACTCGTTGACA-AAGTG 30302
Query 7441 TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTT 7500
| || | || || || |||||||||||||| || || || ||||||| ||
Sbjct 30301 GTTGACCAGACGGTTGTCAAAGTCCTCACCACCCAAGTGAGTGTCACCAGCGGTCGACTT 30242
Query 7501 GACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG 7560
||| || ||||| || | ||||| | | | || ||||| || || ||||| || ||
Sbjct 30241 GACCTCGAAGATGCCCTCCTCAATCGTCAGGAGGGACACATCGAAAGTGCCACCGCCAAG 30182
Query 7561 GTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGC 7620
||| || ||||| ||||| ||| | || ||||| || |||||||| || || ||
Sbjct 30181 GTCGAAGATGAGAACGTTGCGCTCGCCCTCGGCCTTCTTGTCAAGACCGTAGGCAATGGC 30122
Query 7621 CGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATC 7680
||||| || || || || || || || || ||| ||||| ||||| | || ||
Sbjct 30121 AGCCGCAGTCGGCTCGTTGATGATGCGGAGCACGTTGAGGCCCGCAATGAGACCGGCGTC 30062
Query 7681 TTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGT 7740
|| ||||| || || ||||| ||||| |||||||| || ||||| || || |||| |
Sbjct 30061 CTTGGTCGCCTGGCGCTGCGAGTCGTTGAAGTAGGCGGGCACCGTGACAACGGCGTTGTT 30002
Query 7741 GACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800
|||| | ||||| ||||| || || | || ||||| ||||| || ||||| | ||
Sbjct 30001 GACTGTGCCGCCGAGGTACGACTCGGCCGTCTCCTTCATCTTGGTGAGGACCATGGCAGA 29942
Query 7801 AATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860
||||| || | | || || || || || || || || || || ||| ||| ||
Sbjct 29941 GATCTCCTCTGGGGTGAAGACCTTGGTCTCGCCCTTGAACTCGACCTCGATCGCGGGCTT 29882
Query 7861 ATCCGCAGCAC-CGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTT 7919
|| | | | || ||||| ||| | | ||||| ||| | || ||||
Sbjct 29881 ----GCCGTTCTTGTCAATCACCTTGAACGGGAAGTGCTTCATGTCGGCCTGCACCTCCG 29826
Query 7920 GGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCA 7979
|||| ||||| | ||||| |||||||| || || || || ||||| | |||||||
Sbjct 29825 GGTCGTTGAACTTGCGACCGATCAGACGCTTCGCGTCGAACACGGTGTTGTGAGGGTTCA 29766
Query 7980 TGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTC 8019
| || |||||||| ||||| || ||||| || || ||
Sbjct 29765 TCGCCACCTGGTTCTTGGCCGCATCTCCGATGAGGCGCTC 29726
>seq2795
Length=109175
Score = 145 bits (160), Expect = 1e-29
Identities = 345/516 (67%), Gaps = 13/516 (3%)
Strand=Plus/Minus
Query 7247 TCCTCAAAACGTGCACGGGTAA--TGGATG-TATAGAAATCAACGCCGTCGTATAACGAA 7303
||||| ||||| |||||||| | || || | ||| ||| || ||| | | ||
Sbjct 106685 TCCTCGAAACGGGCACGGGTGAGCTGAGTGGTGTAGTCCTCA---CCATCGAAGAGAGAG 106629
Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
||||| |||||||| || || || || | ||| || ||||| || ||||| || |
Sbjct 106628 TCAATCTCAATGGTGGTCTGGGCACCGCTGGAGAGG--GTACGCTTGGCACGCTCGCAAG 106571
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421
| || || | |||||| |||||||| |||| || || | || ||||| || || |
Sbjct 106570 CAGTGCGAAGACGACGGAGGGCACGGGGGTCGCCAGAGAGGTCCTTCTTGGTCTTGCGCT 106511
Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481
|| || | | |||| ||||| | | ||||| || | |||||||||||| |
Sbjct 106510 GGAAGTCCTTCTTGCAGTGGTCCAGGAGGTTGGTGTCGAAGTCCTGACCACCCAAGTGGG 106451
Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541
| || || ||||| || ||||| |||| ||| || | ||||| | | |||||||
Sbjct 106450 TGTCACCGGCGGTAGCCTTGACCGTGAAGACACCACCCTGGATGTTGAGGAGGGAAACAT 106391
Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTTCT 7598
| || ||||||||||||| ||| | || || ||||| || | | | |||
Sbjct 106390 CGAAAGTACCACCACCCAAGTCGTAGATAAGGACGTTGCGCTCCTTGCCAGACTTGCCGG 106331
Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658
| | |||||||| || || || || || || || || || || ||||| || ||| |
Sbjct 106330 CACCAAGACCGTAGGCAATGGCGGCAGCGGTGGGCTCGTTGATGATACGGAGGACGTTGA 106271
Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718
|||| || || | | ||||| || || || || || || ||||| |||||||| |
Sbjct 106270 GGCCGGCGATGGCACCGGCATCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGGCGG 106211
Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754
|||| || | ||| || | | || ||||| ||||
Sbjct 106210 GGACGGTGATGACAGCCTTCTCAACCTTCTTGCCGA 106175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635098201140720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |