Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq245 271 9e-68
seq3337 134 2e-26
>seq245
Length=98725
Score = 271 bits (300), Expect = 9e-68
Identities = 909/1399 (65%), Gaps = 43/1399 (3%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||||| || || |||| ||| || || | |||| |||
Sbjct 89283 CCCCAGCACATGATCATGCGTGTTGCTGTCGGAATCTGGGGCGACAACGTTGAGCGCGTT 89342
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
| ||||| ||| || |||||| | | |||| |||||| | || || ||||||
Sbjct 89343 ATCGAGACCTACAACCTGATGTCGAGCAAGTTCTTCACCCACGCCTCTCCCACACTCTTC 89402
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
||||| ||||| || | || ||||| |||||||||| | | | ||||||||
Sbjct 89403 AACGCCGGTACCCCCCAGGCGCAGCTGTCCTCTTGTTTCCTTGTCGATATGAAGGAGGAC 89462
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851
|| ||| | || || |||| ||| |||| ||||| ||||| ||| |||||||
Sbjct 89463 TCTATCGAGGGTATCTACGACACCCTCAAGACCTGTGCTATGATCTCCAAGATGGCTGGT 89522
Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911
|| || || | || |||| || | || | | ||| ||| || || ||
Sbjct 89523 GGCATTGGTCTCAACGTCCACCGCATCCGCGCTACCGGCTCTTACATTGCTGGCACCAAC 89582
Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971
|| || | || | |||| ||||| || || || ||| ||| || ||||| ||
Sbjct 89583 GGCACCTCTAACGGCGTCGTTCCCATGCTCCGTGTCTTCAACAACACTGCCCGCTACGTC 89642
Query 111972 AACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 112025
|||| | || ||| | | || || | || |||| || ||||| ||||||
Sbjct 89643 GACCAGGGCGGAAACAAGCGCCCC---GGTGCTTTTGCCATCTACCTCGAGCCTTGGCAC 89699
Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGT 112083
|| ||| | | || ||| | || |||| ||||| || | ||||||| |||| |
Sbjct 89700 GCTGATGTATTTGACTTCTTGGATCTGCGCAAGAACCATGGGAAGGAGGAGGTCCGCGCT 89759
Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143
|| || || || ||| |||||||| || |||||||||||||||||||| ||| |||
Sbjct 89760 --CGTGACCTATTTCTCGCCCTCTGGATCCCCGATCTCTTCATGAAGAGAGTGGAGAAGA 89817
Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203
||| | ||| ||||| | || || || || || |||||| |||| | || |
Sbjct 89818 ACGGCGACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGTCTCGCCGACTGCTACGGCG 89877
Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAG--GAAG----AAAGTCGGGCGACTGCGA 112257
|||| || || ||||| ||| ||||||||| || | || |||| ||| |
Sbjct 89878 AGGAATTCGAGGCCCTGTACGAGAAGTACGAGCAGATGGGCAAAGGTCGCAAGACCCTAA 89937
Query 112258 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317
|| ||| || | ||| | || || ||| || |||||||||||||||||| |
Sbjct 89938 AGGC-CCAAAAGC-----TCTGGTATGCCATCCTCGAGGCTCAAACCGAGACTGGTAACC 89991
Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377
| | |||||| ||||| || || |||| ||||| || || ||||| ||||| |
Sbjct 89992 CCTTTATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCA 90051
Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437
|| | |||||||| || || || ||| | || | | |||||| || |
Sbjct 90052 TCCGTAACTCCAACCTATGCACTGAGATCATTGAGTACTGCGCTCCTGATGAGGTCGCAG 90111
Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT- 112496
|||| ||||| || || | || || |||| | || || | | | || | | |||
Sbjct 90112 TGTGCAACCTGGCCTCGCTTGCGCTGCCCACCTTCGTTGA-CTACA-ACGAGGGTGTTTA 90169
Query 112497 -GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555
|| | | || || ||||| || || | ||| ||||| |||||| | ||
Sbjct 90170 CGACTTCCAGAAGCTTCACGAGGTCACCCAGGTCGTCGTTCGCAACCTCAACAGAATCAT 90229
Query 112556 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615
||| || ||||| || || ||||| || || ||| | ||||| || ||
Sbjct 90230 CGATGTCAACCACTACCCGGTCCAGGAGGCTCGCAACAGCAACATGCGCCACCGCCCCAT 90289
Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACGCATTT-G 112671
|||||||||||| || ||||| || |||| | ||||| | || || || || |
Sbjct 90290 TGGTCTCGGTGTTCAGGGTCTTGCCGATG----CCTTCTTGGCCCTCCGCATGCCCTTCG 90345
Query 112672 ATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTC 112731
| ||| |||||| || |||| | || || |||||||| || ||||| || |
Sbjct 90346 AGTCCCCCGAAGCTCGTGACCTCAACAAGAAGATCTTCGAGACAATCTACCACGCTGCCC 90405
Query 112732 TTG--AGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789
|| | | |||| ||||||| ||| || || || ||| | || | |||||||||
Sbjct 90406 TTACCATGTCGGTTC--AGTTGGCCAAGGAGGAGGGCCCCTATCAGACGTATGAGGGTTC 90463
Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACT 112848
|| | ||| || || | || || | || |||||| || || | ||| | || ||
Sbjct 90464 CCCTGTTTCTCAGGGCATCCTCCAGTACGACATGTGG-AATGTCAAACCCTCGGATCTCT 90522
Query 112849 ACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908
|||||||| |||| ||||| | |||||| || | ||| | || ||| ||| |
Sbjct 90523 GGGACTGGGATTCTCTGAAGGAGCAGATCAAGCAGCACGGTGTCCGCAACTCTCTGCTCG 90582
Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968
| || || ||||| || ||| |||| | || ||||||||||| || || ||||| ||||
Sbjct 90583 TCGCGCCCATGCCGACTGCCAGCACCTCTCAGATCTTGGGTAACAACGAGTGCTTCGAAC 90642
Query 112969 CCTACACGACGAACATCTA 112987
| ||||| | ||||| ||
Sbjct 90643 CTTACACCTCCAACATTTA 90661
>seq3337
Length=46210
Score = 134 bits (148), Expect = 2e-26
Identities = 166/225 (74%), Gaps = 9/225 (4%)
Strand=Plus/Minus
Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT--- 102155
|||||| ||||| || || |||| ||||| || || ||||| | |||||| ||
Sbjct 4617 GCCATC---ACAGTCCCTTGCATTCGCAAGAAGGCCGACTGGGCCCTCAAGTGGATTAGC 4561
Query 102156 GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATC 102215
||| ||||| ||||| || |||| || | || ||||| || ||||| |||
Sbjct 4560 GATGAGAAGTCC---TCCTTCGCCCAGCGCCTGGTTGCCTTTGCTGCCGTCGAGGGCATC 4504
Query 102216 TTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGT 102275
||||| |||| ||||| | || | |||||||||||||| ||||||||||| |||
Sbjct 4503 TTCTTTAGTGGTGCCTTCGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCGGGT 4444
Query 102276 CTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320
|| ||||||||||||||| ||||||||||||||||| || |||
Sbjct 4443 CTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCAC 4399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620708585057760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |