Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq245 271 9e-68 seq3337 134 2e-26 >seq245 Length=98725 Score = 271 bits (300), Expect = 9e-68 Identities = 909/1399 (65%), Gaps = 43/1399 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || || |||| ||| || || | |||| ||| Sbjct 89283 CCCCAGCACATGATCATGCGTGTTGCTGTCGGAATCTGGGGCGACAACGTTGAGCGCGTT 89342 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||| || |||||| | | |||| |||||| | || || |||||| Sbjct 89343 ATCGAGACCTACAACCTGATGTCGAGCAAGTTCTTCACCCACGCCTCTCCCACACTCTTC 89402 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| ||||| || | || ||||| |||||||||| | | | |||||||| Sbjct 89403 AACGCCGGTACCCCCCAGGCGCAGCTGTCCTCTTGTTTCCTTGTCGATATGAAGGAGGAC 89462 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || ||| | || || |||| ||| |||| ||||| ||||| ||| ||||||| Sbjct 89463 TCTATCGAGGGTATCTACGACACCCTCAAGACCTGTGCTATGATCTCCAAGATGGCTGGT 89522 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911 || || || | || |||| || | || | | ||| ||| || || || Sbjct 89523 GGCATTGGTCTCAACGTCCACCGCATCCGCGCTACCGGCTCTTACATTGCTGGCACCAAC 89582 Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971 || || | || | |||| ||||| || || || ||| ||| || ||||| || Sbjct 89583 GGCACCTCTAACGGCGTCGTTCCCATGCTCCGTGTCTTCAACAACACTGCCCGCTACGTC 89642 Query 111972 AACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 112025 |||| | || ||| | | || || | || |||| || ||||| |||||| Sbjct 89643 GACCAGGGCGGAAACAAGCGCCCC---GGTGCTTTTGCCATCTACCTCGAGCCTTGGCAC 89699 Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGT 112083 || ||| | | || ||| | || |||| ||||| || | ||||||| |||| | Sbjct 89700 GCTGATGTATTTGACTTCTTGGATCTGCGCAAGAACCATGGGAAGGAGGAGGTCCGCGCT 89759 Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 || || || || ||| |||||||| || |||||||||||||||||||| ||| ||| Sbjct 89760 --CGTGACCTATTTCTCGCCCTCTGGATCCCCGATCTCTTCATGAAGAGAGTGGAGAAGA 89817 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203 ||| | ||| ||||| | || || || || || |||||| |||| | || | Sbjct 89818 ACGGCGACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGTCTCGCCGACTGCTACGGCG 89877 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAG--GAAG----AAAGTCGGGCGACTGCGA 112257 |||| || || ||||| ||| ||||||||| || | || |||| ||| | Sbjct 89878 AGGAATTCGAGGCCCTGTACGAGAAGTACGAGCAGATGGGCAAAGGTCGCAAGACCCTAA 89937 Query 112258 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 || ||| || | ||| | || || ||| || |||||||||||||||||| | Sbjct 89938 AGGC-CCAAAAGC-----TCTGGTATGCCATCCTCGAGGCTCAAACCGAGACTGGTAACC 89991 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377 | | |||||| ||||| || || |||| ||||| || || ||||| ||||| | Sbjct 89992 CCTTTATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCA 90051 Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437 || | |||||||| || || || ||| | || | | |||||| || | Sbjct 90052 TCCGTAACTCCAACCTATGCACTGAGATCATTGAGTACTGCGCTCCTGATGAGGTCGCAG 90111 Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT- 112496 |||| ||||| || || | || || |||| | || || | | | || | | ||| Sbjct 90112 TGTGCAACCTGGCCTCGCTTGCGCTGCCCACCTTCGTTGA-CTACA-ACGAGGGTGTTTA 90169 Query 112497 -GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555 || | | || || ||||| || || | ||| ||||| |||||| | || Sbjct 90170 CGACTTCCAGAAGCTTCACGAGGTCACCCAGGTCGTCGTTCGCAACCTCAACAGAATCAT 90229 Query 112556 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615 ||| || ||||| || || ||||| || || ||| | ||||| || || Sbjct 90230 CGATGTCAACCACTACCCGGTCCAGGAGGCTCGCAACAGCAACATGCGCCACCGCCCCAT 90289 Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACGCATTT-G 112671 |||||||||||| || ||||| || |||| | ||||| | || || || || | Sbjct 90290 TGGTCTCGGTGTTCAGGGTCTTGCCGATG----CCTTCTTGGCCCTCCGCATGCCCTTCG 90345 Query 112672 ATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTC 112731 | ||| |||||| || |||| | || || |||||||| || ||||| || | Sbjct 90346 AGTCCCCCGAAGCTCGTGACCTCAACAAGAAGATCTTCGAGACAATCTACCACGCTGCCC 90405 Query 112732 TTG--AGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 || | | |||| ||||||| ||| || || || ||| | || | ||||||||| Sbjct 90406 TTACCATGTCGGTTC--AGTTGGCCAAGGAGGAGGGCCCCTATCAGACGTATGAGGGTTC 90463 Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACT 112848 || | ||| || || | || || | || |||||| || || | ||| | || || Sbjct 90464 CCCTGTTTCTCAGGGCATCCTCCAGTACGACATGTGG-AATGTCAAACCCTCGGATCTCT 90522 Query 112849 ACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908 |||||||| |||| ||||| | |||||| || | ||| | || ||| ||| | Sbjct 90523 GGGACTGGGATTCTCTGAAGGAGCAGATCAAGCAGCACGGTGTCCGCAACTCTCTGCTCG 90582 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968 | || || ||||| || ||| |||| | || ||||||||||| || || ||||| |||| Sbjct 90583 TCGCGCCCATGCCGACTGCCAGCACCTCTCAGATCTTGGGTAACAACGAGTGCTTCGAAC 90642 Query 112969 CCTACACGACGAACATCTA 112987 | ||||| | ||||| || Sbjct 90643 CTTACACCTCCAACATTTA 90661 >seq3337 Length=46210 Score = 134 bits (148), Expect = 2e-26 Identities = 166/225 (74%), Gaps = 9/225 (4%) Strand=Plus/Minus Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT--- 102155 |||||| ||||| || || |||| ||||| || || ||||| | |||||| || Sbjct 4617 GCCATC---ACAGTCCCTTGCATTCGCAAGAAGGCCGACTGGGCCCTCAAGTGGATTAGC 4561 Query 102156 GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATC 102215 ||| ||||| ||||| || |||| || | || ||||| || ||||| ||| Sbjct 4560 GATGAGAAGTCC---TCCTTCGCCCAGCGCCTGGTTGCCTTTGCTGCCGTCGAGGGCATC 4504 Query 102216 TTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGT 102275 ||||| |||| ||||| | || | |||||||||||||| ||||||||||| ||| Sbjct 4503 TTCTTTAGTGGTGCCTTCGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCGGGT 4444 Query 102276 CTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || ||||||||||||||| ||||||||||||||||| || ||| Sbjct 4443 CTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCAC 4399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620708585057760