Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq245 150 2e-31 seq799 100 3e-16 >seq245 Length=98725 Score = 150 bits (166), Expect = 2e-31 Identities = 1008/1604 (63%), Gaps = 63/1604 (4%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGAT 109556 ||| | |||||| ||||| |||||||| ||||| || || ||||| | | | | | Sbjct 90914 GTTGAGCGACTGCGACTGGTCGATGAAGGCGCCACGGTCGGCAGCCATTTGCACAACGGT 90855 Query 109557 ACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTC 109616 | || || |||||||| ||||||||||||| ||||| || ||||||| Sbjct 90854 GCGCT---GGGAGATTTCCCAAACAGTCTTGTACAGCGCCTTGACCTCGGTAGGAATGTT 90798 Query 109617 CACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGA 109673 |||||| |||||||| ||| || | |||| | | |||||| | | || Sbjct 90797 GGGGATGTTCTGAATAGA---ACCGTTCTCGGCAATGATGCGGTTCTTCATAGCGTCAGA 90741 Query 109674 CCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTG--TTGACCACGACAAATTCA 109731 ||| | || | | ||| || | ||||| | | ||||| || || || Sbjct 90740 CCACAAGCCCATGTCGACGAGGTCCTT--CAAGAGCCAAGGGTTGACGACTTGGAACTCG 90683 Query 109732 CCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTG 109791 |||||||| || || |||| ||||| | ||||| |||||||| ||||| ||||| Sbjct 90682 CCAGCAAGGACACGACGCTGGTAAATGTTGGAGGTGTAAGGTTCGAAGCACTCGTTGTTA 90623 Query 109792 CCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGA 109851 || | ||| || | ||| || || |||||||| || | ||| ||| ||| |||| | Sbjct 90622 CCCAAGATCTGAGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGCAGAGAGTTGCGGACA 90563 Query 109852 CCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTC 109911 || | | ||| | | |||| || | ||||| || | || | | | || | | Sbjct 90562 CCGTGCTGCTTGATCTGCTCCTTCAGAGAATCCCAGTCCCAGAGATC-CGAGGGTTTGAC 90504 Query 109912 TCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTC 109971 || |||||| || || || | |||| || | |||| ||||||| | || Sbjct 90503 -----ATTCCACATGTCGTACTGGAGGATGCCCTGAGAAACAGGGGAACCCTCATACGTC 90449 Query 109972 TCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATA 110031 | || | ||||| ||| |||||||| || || || || || || || Sbjct 90448 TGATAGGGGCCCTCCTCCTTGGCCAACTGAACCGACATGGTAAGGGCAGCGTGGTAGATT 90389 Query 110032 GTCTCAAAAATATGAGCATTCATGAGG---CGAGACTCTTCACAGTCGAAGGGAA----G 110084 ||||| || || | || ||||| |||| || | |||||||| | | Sbjct 90388 GTCTCGAAGATCTTC---TTGTTGAGGTCACGAGCTTCGGGGGACTCGAAGGGCATGCGG 90332 Query 110085 ACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTT 110144 | | ||||| |||| || ||||||||||||||||||||||||||||| || Sbjct 90331 AGGGCCAAGAAGG----CATCGGCAAGACCCTGAACACCGAGACCAATGGGGCGGTGGCG 90276 Query 110145 CATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAG 110204 |||||| | ||||| | || ||||| |||| ||||||| | ||||| Sbjct 90275 CATGTTGCTGTTGCGAGCCTCCTGGACCGGGTAGTGGTTGACATCGATGATTCTGTTGAG 90216 Query 110205 ATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCG--AACGTTTTCGTC 110262 || || || |||| || || || || | | | ||| ||| |||| Sbjct 90215 GTTGCGAACGACGACCTGGGTGACCTCGTGAAGCTTCTGGAAGTCGTAAACACCCTCGTT 90156 Query 110263 TCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCT 110322 | | || | |||| || |||| || || || |||||||| | ||| || Sbjct 90155 G--TAGTCAACGAAGGTGGGCAGCGCAAGCGAGGCCAGGTTGCACACTGCGACCTCATCA 90098 Query 110323 TTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTC 110382 || ||| || | || || || || | |||||| | ||| ||||| |||| Sbjct 90097 GGAGCGCAGTACTCAATGATCTCAGTGCATAGGTTGGAGTTACGGATGGTACCCAGGTTC 90038 Query 110383 TTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCC 110442 ||||| || ||| |||| |||||||| |||||||| | ||| ||||||| || Sbjct 90037 TTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCG 89978 Query 110443 GTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGT-TAGCGA- 110500 || || | || ||| ||||| | ||| | || ||| | | | || | |||| Sbjct 89977 GTTTGAGCCTCGAGGATGGCATACCAGA-----GCTTTTGGGCCTTTAGGGTCTTGCGAC 89923 Query 110501 ----GACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCA 110556 | || || | ||||||||| ||||| | |||| ||||||| ||||| || Sbjct 89922 CTTTGCCCATC-TGCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCGCCGTAGCAGTCG 89864 Query 110557 GAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTC 110616 | ||||| || || ||| || | ||| | ||| | || || ||| || ||| Sbjct 89863 GCGAGACCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCCACTCTC 89804 Query 110617 TTCATGAACAGGTCAGGAATCCACATCGCCGAGAAA-AGGTCACGGCAACGAGCCTCTTC 110675 |||||||| || || || ||||| | | ||||||| |||||||| || |||| || Sbjct 89803 TTCATGAAGAGATCGGGGATCCAGA-GGGCGAGAAATAGGTCACGAGCGCGGACCTCCTC 89745 Query 110676 ATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAG 110735 | || ||||| ||| || ||||| ||||| | | ||| | |||||| || ||||| Sbjct 89744 CTTCCCATGGTTCTTGCGCAGATCCAAGAAGTCAAATACATCAGCGTGCCAAGGCTCGAG 89685 Query 110736 ATAGACAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGC 110792 |||| || | | || || || |||||| || ||||| || ||| Sbjct 89684 GTAGATGGCAAAAGCACCGGGGCGCTTGTTTCCGCCCTGGTCGACGTAGCGGGCAGTGTT 89625 Query 110793 ATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCT 110852 |||||||| | |||||| |||| | || | || || || || || ||| Sbjct 89624 GTTGAAGACACGGAGCATGGGAACGACGCCGTTAGAGGTGCCGTTGGTGCCAGCAATGTA 89565 Query 110853 GGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAAT 110912 || | || || ||| ||||| | | |||||| ||||| ||| ||| || Sbjct 89564 AGAGCCGGTAGCGCGGATGCGGTGGACGTTGAGACCAATGCCACCAGCCATCTTGGAGAT 89505 Query 110913 TTGTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAA 110971 ||||| ||| |||| || | || ||||| || || || || |||| | | | Sbjct 89504 CATAGCACAGGTCT-TGAGGGTGTCGTAGATACCCTCGATAGAGTCCTCCTTCATATCGA 89446 Query 110972 TTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCG 111031 || || ||||| |||| ||| | | || || || || ||||||||||| || | | Sbjct 89445 CAAGGAAACAAGAGGACAGCTGCGCCTGGGGGGTACCGGCGTTGAAGAGTGTGGGAGAGG 89386 Query 111032 CATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGA 111073 | || ||| ||| |||| |||||| |||||| || |||| Sbjct 89385 CGTGGGTGA--AGAACTTGCTCGACATCAGGTTGTAGGTCTCGA 89344 >seq799 Length=14066 Score = 100 bits (110), Expect = 3e-16 Identities = 330/504 (65%), Gaps = 17/504 (3%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || |||||||| || || || | || || | || || || ||| | ||||| || | Sbjct 3173 CGGTCGAAACGGCCGGGACGCATCAGGGCCTTGTCGAGGATGTCGGCTCGGTTGGTGCCC 3232 Query 11563 GCAATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | || || | || | ||| | ||| ||| |||||||| || ||||| | |||| Sbjct 3233 GCGAGCACAACCA--CCTG-CTCCTGGGTGTTGAAGCCGTCCATCTCGGTGAGGATCTGG 3289 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCA---CCTGCCGAACGCTTCTTA 11676 || | ||| || ||||| |||||| | ||| | || || | | | Sbjct 3290 TTCAGCGTGGCCTCGCGCTCGTCGTTGCCGCCCATGCGGTTGCCCTCCTGTCTCGACCGG 3349 Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736 |||| ||||| ||||| || ||||| | ||| || || ||| || ||| || Sbjct 3350 CCGATGGCGTCGATCTCGTCAATGAAGATGATGCAAGGGGCGTTCTTCCGCGCCGTCGCG 3409 Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG--CGG 11794 || || || || || | | || ||||| ||||||||||| ||||| | | | | Sbjct 3410 AACAGGTCGCGGACTCTGGAGGGGCCGACACCCACGAACATCTCGACGAACTCGGAACCG 3469 Query 11795 CAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 | | | ||||| ||||||||| |||||| || || |||| ||||| || |||| Sbjct 3470 CTCA-CGCTGAA-GAAGGGAACGCCAGACTCGCCGGCCGTGGCCTTGGCGAGCAGCGTCT 3527 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCC 11912 |||| || || || | || || || | || || |||||||||||||| || || || Sbjct 3528 TACCGGTTCCGGGAGGGCCGGCCAGGATAGCACCGCGGGGGATCTTGGCGCCTAACCTC- 3586 Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGA 11972 | | ||||| || ||||||||||| |||| |||| || ||| |||||| Sbjct 3587 -TCGAACCGCTCCGGGGTCTTGAGGAAGCTGACAAACTCCATAATCTCCGTCTTGGCCTC 3645 Query 11973 GTCGATACCCTCAACATCGGTGAA 11996 ||| || || | || ||| |||| Sbjct 3646 GTCCATGCCGGCGACGTCGCTGAA 3669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588943915532400