Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq245 315 1e-80
seq3337 152 1e-31
>seq245
Length=98725
Score = 315 bits (348), Expect = 1e-80
Identities = 1042/1596 (65%), Gaps = 72/1596 (5%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | || | |||||||||| ||||| || ||||||||||| |||||
Sbjct 91042 ACAGTGAACTGAATAGGCGCTGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTCTTC 90983
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668
|| || ||| |||||| | |||||| |||| ||| |||| | ||| |
Sbjct 90982 AGTCCGAGCTT---CCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCC---ATAGT 90933
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
| |||| | | |||| | ||| || ||||| |||||| ||||| | | |
Sbjct 90932 CGGGTCTTTCATGTGG---------ATGTTGAGCGACTGCGACTGGTCGATGAAGGCGCC 90882
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| ||| || ||||| | | | | |||||||| ||||| || |||||| | |
Sbjct 90881 ACGGTCGGCAGCCATTTGCACAACGGTGCGCTGGGAGATTTCCCAAACAGTCTTGTACAG 90822
Query 212789 TTCTTTGAGGTCCTCTG--GGAA-GCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGT 212845
| |||| |||| | |||| | |||||||||||| | ||| || || | | |
Sbjct 90821 CGCCTTGA---CCTCGGTAGGAATGTTGGGGATGTTCTGAATAGAACC---GT-TCTCGG 90769
Query 212846 CA--GCTGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCA 212901
|| | ||| | ||| | || ||| | |||| || | ||| ||| | |
Sbjct 90768 CAATGATGCGGTTCTTCATAGCGTCAGACCACAAGCCCATGTCGACGAGGTCCTTCAAGA 90709
Query 212902 GGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAG 212961
| ||||||||| | ||||| || || | || || | | |||||||| ||| || |
Sbjct 90708 GCCAAGGGTTGACGACTTGGAACTCGCCAGCAAGGACACGACGCTGGTAAATGTTGGAGG 90649
Query 212962 TGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGG 213021
|||| || |||| || ||||||||| |||| ||||| | |||||||| || |||||||
Sbjct 90648 TGTAAGGTTCGAAGCACTCGTTGTTACCCAAGATCTGAGAGGTGCTGGCAGTCGGCATGG 90589
Query 213022 GAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCC 213081
| || || || ||| ||| | || ||||||| ||| | | || |||
Sbjct 90588 GCGCGACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGCTCCTTCAGAGAATCCC 90529
Query 213082 AGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGC 213141
||||||| || ||| | || || ||||||||||| |||| | |||||
Sbjct 90528 AGTCCCAG---------AGATCCGAGGGTTTGACATTCCACATGTCGTACTGGAGGATGC 90478
Query 213142 CTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGC 213201
| | || ||| |||| || | |||||||| | ||||||||||| ||
Sbjct 90477 CCTGAGAAACAGGGGAACCCTCATACGTCTGATAGGGGCCCTCCTCCTTGGCCAACTGAA 90418
Query 213202 AGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGG 213261
||| |||||||||| |||||| || || || |||| | ||||||| | |
Sbjct 90417 CCGACATGGTAAGGGCAGCGTGGTAGATTGTCTCGAAGATCTTCTTGTTGAGGTCACGAG 90358
Query 213262 CCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCC 213321
| || |||||| ||||||||| | | ||| |||| || || ||||| || |
Sbjct 90357 CTTCGGGGGACTCGAAGGGCATGCGGAGGGCCAAGAAGGCATCGGCAAGACCCTGAACAC 90298
Query 213322 CGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAG 213380
||| || ||||| | ||| | || ||| ||| |||| ||||| | ||||| |
Sbjct 90297 CGAGACCAATGGGGCGGTGGCGCATGTTGCTGTTGCGAGC-CTCCTGGACCGGGTAGTGG 90239
Query 213381 TTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTAC 213440
||| |||||||| ||||||||||||| | | || | |||||| | | || | |
Sbjct 90238 TTGACATCGATGATTCTGTTGAGGTTGCGAACGACGACCTGGGTGACCTCGTGAAGCTTC 90179
Query 213441 TCGTGATTGAACACGTAGCCCCC--GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCA 213498
| | | | | || | || | || | || || ||||| || | |||||
Sbjct 90178 TGGAAGTCGTAAAC--ACCCTCGTTGTAGTCAACGAAGGTGGGCAGCGCAAGCGAGGCCA 90121
Query 213499 GGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGC 213558
||||||| || || ||||| | || | |||||| |||||||| ||||| ||||||
Sbjct 90120 GGTTGCACACTGCGACCTCATCAGGAGCGCAGTACTCAATGATCTCAGTGCATAGGTTGG 90061
Query 213559 TGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGA 213618
| |||||||| |||||||||| ||||| ||| |||||||| |||||||||||
Sbjct 90060 AGTTACGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGA 90001
Query 213619 GCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCT 213676
|||| ||||| || ||||| || | | | || || ||| |||||| |
Sbjct 90000 GCATAAAGGGGTTACCAGTCTCGGTTTGAGCCTCGAGGAT--GGCATACCAGAGCTTTTG 89943
Query 213677 GGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTT 213736
|||||| | | | ||| || | | | |||||||| ||||| || | |
Sbjct 89942 GGCCTTTAGGGTCTTGC-GAC--CTTTGCCCATCTGCTCGTACTTCTCGTACAGGGCCTC 89886
Query 213737 GAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCA 213796
|||||| | ||| || | | || || || || ||| |||||||| ||||
Sbjct 89885 GAATTCCTCGCCGTAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATGAGAGTCCA 89826
Query 213797 GTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855
||| |||| | |||| ||||||| |||||| || || |||| ||| || ||| || |
Sbjct 89825 GTCGCCGTTCTTCTCC-ACTCTCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGAAATA 89767
Query 213856 GGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGA 213915
|||| | | | ||| ||| ||| ||| ||||||||||| | |||||||| |
Sbjct 89766 GGTCACGAGCGCGGACCTCCTCCTTCCCATGGTTCTTGCGCAGATCCAAGAAGTCAAATA 89707
Query 213916 TGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCT 213972
|| |||||||| ||||| | |||||||||||| || || || | |||| |||||||
Sbjct 89706 CATCAGCGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTTCCGCCCT 89647
Query 213973 GGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACT 214032
|||| || | ||| ||||||||| || || | ||| || | ||||| ||
Sbjct 89646 GGTCGACGTAGCGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGACGCCGTTAGAGG 89587
Query 214033 GTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA----GAGC 214088
|||||||| || || || || ||||||| || | || ||| |||| |||
Sbjct 89586 TGCCGTTGGTGCCAGCAATGTAAGAGCCGGTAGCGC---GGATGC-GGTGGACGTTGAGA 89531
Query 214089 CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAG 214124
|| |||||||| || |||||||||||| || |||
Sbjct 89530 CCAATGCCACCAGCCATCTTGGAGATCATAGCACAG 89495
>seq3337
Length=46210
Score = 152 bits (168), Expect = 1e-31
Identities = 339/504 (67%), Gaps = 11/504 (2%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
|||||||| | || | ||||| |||||||| ||||| || ||| ||||||||||||
Sbjct 4097 TGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCC 4156
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGG 47959
|||||| ||||||||||| | || || ||| | ||| | | | || ||
Sbjct 4157 ATGAAGTCGAAGGGGTTGGAAGACTTGTAGACCTTTTCGTTGCCAAGCGCAACAAGGAGA 4216
Query 47960 TGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGAC 48019
| || || ||| |||| ||||| | ||| ||| || ||||||||| | ||||
Sbjct 4217 CGGTCGGCAACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGGGCG 4276
Query 48020 ACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGC 48079
|| | ||||| || || ||||||| ||| |||| || || || | | || | |
Sbjct 4277 CAAGGAAGAGCCTCCGTCAGGAACTCCTGCTCAATCTTGACAGCATCGACAATGATGTCC 4336
Query 48080 T---TAACGCGGGACTCTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135
| |||| | | ||| || | || ||| ||||| || ||| | | |||||
Sbjct 4337 TCGATAAC-CTGCTTGCTGGGGCGGTTCTTG---AGGTG---GGAATACAAGAGACAGGC 4389
Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195
||||| |||||| || ||||| || ||||||| ||||||||||| ||||| ||
Sbjct 4390 GAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCCGG 4449
Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255
||||| || | || ||||||||||| || | ||||| | ||| |||||||||||
Sbjct 4450 CATGAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAGGCACCACTAAAGAAGATGCC 4509
Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315
||| || || || || || || | || |||| || | |||| || |||||
Sbjct 4510 CTCGACGGCAGCAAAGGCAACCAGGCGCTGGGCGAAGGAGGACTTCTCATCGCTAATCCA 4569
Query 48316 GGAAAGCGCCCAGTCTGCCTTCTT 48339
|| |||||||| ||||||||
Sbjct 4570 CTTGAGGGCCCAGTCGGCCTTCTT 4593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931482054750720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |