Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq245 140 4e-28
seq3441 91.5 2e-13
seq3337 89.7 6e-13
>seq245
Length=98725
Score = 140 bits (154), Expect = 4e-28
Identities = 881/1401 (63%), Gaps = 43/1401 (3%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| || || |||| ||| || || || |||| ||
Sbjct 89283 CCCCAGCACATGATCATGCGTGTTGCTGTCGGAATCTGGGGCGACAACGTTGAGCGCGTT 89342
Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| ||||| ||| || |||||| |||| | | ||| ||||| | || || ||||
Sbjct 89343 ATCGAGACCTACAACCTGATGTCGAGCAAGTTCT--TCACCCACGCCTCTCCCACACTCT 89400
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||| || ||||| || ||||| ||||| ||| |||||| ||| | |||||||
Sbjct 89401 TCAACGCCGGTACCCCCCAGGCGCAGCTGTCCTCTTGTTTCCTTGTCGATATGAAGGAGG 89460
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|||| ||| | |||||||| | || || | | ||||| ||||| ||| |||||
Sbjct 89461 ACTCTATCGAGGGTATCTACGACACCCTCAAGACCTGTGCTATGATCTCCAAGATGGCTG 89520
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| || ||||| | || |||| | | || | ||| ||| || || |
Sbjct 89521 GTGGCATTGGTCTCAACGTCCACCGCATCCGCGCTACCGGCTCTTACATTGCTGGCACCA 89580
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| || || | || | |||| ||||| || || || ||| ||| || ||||| |
Sbjct 89581 ACGGCACCTCTAACGGCGTCGTTCCCATGCTCCGTGTCTTCAACAACACTGCCCGCTACG 89640
Query 75570 TAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623
| | || | || ||| | | || | | || ||||| | || || ||||
Sbjct 89641 TCGACCAGGGCGGAAACAAGCGCCCC---GGTGCTTTTGCCATCTACCTCGAGCCTTGGC 89697
Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683
| || ||| | | || ||| | || | || ||||| || | || |||| ||
Sbjct 89698 ACGCTGATGTATTTGACTTCTTGGATCTGCGCAAGAACCATGGGAAGGAGGAGGTCCGCG 89757
Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743
| | || || ||| |||| ||||| || || || ||||||||| | || ||| ||
Sbjct 89758 CTCGTGACCTATTTCTCGCCCTCTGGATCCCCGATCTCTTCATGAAGAGAGTGGAGAAGA 89817
Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803
|| | ||| |||| | || || || || || |||||| ||||| || |
Sbjct 89818 ACGGCGACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGTCTCGCCGACTGCTACGGCG 89877
Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGACTG 75860
|||| || || ||||| ||| ||||| || || ||| | || ||| |||
Sbjct 89878 AGGAATTCGAGGCCCTGTACGAGAAGTACGAGCAGATGGGCAAAGGTCGCAA---GACCC 89934
Query 75861 TACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920
|| ||| | | ||| | || || ||| | | || || |||||||| | || |
Sbjct 89935 TAAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACTGGTAACCCCT 89994
Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980
|||||| |||||||||||| ||| ||||| ||||| ||||| |||| || |||
Sbjct 89995 TTATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATCC 90054
Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040
| ||| || || ||||| || || | |||||| | | |||||| || || |
Sbjct 90055 GTAACTCCAACCTATGCACTGAGATCATTGAGTACTGCGCTCCTGATGAGGTCGCAGTGT 90114
Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGA-CTCGCACTTTT--G 76097
|||| |||| || | || || || | | || ||| | | | | ||| |
Sbjct 90115 GCAACCTGGCCTCGCTTGCGCTGCCCACCTTCGT---TGACTACAACGAGGGTGTTTACG 90171
Query 76098 ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTG 76157
| | | || ||||| || |||| || | || || || ||| || |||| |
Sbjct 90172 ACTTCCAGAAGCTTCACGAGGTCACCCAGGTCGTCGTTCGCAACCTCAACAGAATCATCG 90231
Query 76158 ACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217
| || || || || || || || || || ||||| ||| | || ||||
Sbjct 90232 ATGTCAACCACTACCCGGTCCAGGAGGCTCGCAACAGCAACATGCGCCACCGCCCCATTG 90291
Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT-----TTGA 76272
|| | |||||||| ||||| || |||| || ||| ||| || ||||| | ||
Sbjct 90292 GTCTCGGTGTTCAGGGTCTTGCCGATGCCTTC---TTG-GCC-CTCCGCATGCCCTTCGA 90346
Query 76273 TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCT 76332
|| ||||| || | || ||||| || || || || ||||| ||||
Sbjct 90347 GTCCCCCGAAGCTCGTGACCTCAACAAGAAGATCTTCGAGACAATCTACCACGCTGCCCT 90406
Query 76333 GGAGGCGAGTTG--TGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCT 76390
| || | | | ||||| | | | || ||||| |||| | |||||||||
Sbjct 90407 TAC--CATGTCGGTTCAGTTGGCCAAGGAGGAGGGCCCCTATCAGACGTATGAGGGTTCC 90464
Query 76391 CCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACT 76448
|| | || || || | || |||| || |||||| || || ||||| | || ||
Sbjct 90465 CCTGTTTCTCAGGGCATCCTCCAGTACGACATGTGG-AATGTCAAACCCTCGGATCT-CT 90522
Query 76449 ACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 76508
||||||||| ||| ||||| | |||||| || | ||| | || ||| ||| |
Sbjct 90523 GGGACTGGGATTCTCTGAAGGAGCAGATCAAGCAGCACGGTGTCCGCAACTCTCTGCTCG 90582
Query 76509 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 76568
| || || ||||| || ||| |||| | || ||||||||||| || || ||||| ||||
Sbjct 90583 TCGCGCCCATGCCGACTGCCAGCACCTCTCAGATCTTGGGTAACAACGAGTGCTTCGAAC 90642
Query 76569 CATACACAACAAACATCTACC 76589
| ||||| | ||||| ||||
Sbjct 90643 CTTACACCTCCAACATTTACC 90663
>seq3441
Length=28323
Score = 91.5 bits (100), Expect = 2e-13
Identities = 198/291 (68%), Gaps = 14/291 (5%)
Strand=Plus/Minus
Query 13607 TGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCT 13666
|| ||||||||| |||| || ||||| || || || | | || ||||| |||| | |
Sbjct 19371 TGCACTCTCATTCTCACCGAAGGTGACTCTGCCAAGAGTTTGGCTGTTGCCGGTCGCGCA 19312
Query 13667 GTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAA-TGTAAGAATGTTCG 13725
| | | | || | | ||| || ||||| ||||| |||||| ||| ||| || ||
Sbjct 19311 ATTCTCGACCCCGACCGCATCGGAGTCTTCCCCCTTCGTGGTAAAATGTT-GAACGTCCG 19253
Query 13726 GGACGCTTCGGTGGCACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCT 13785
||||| || | | ||| |||| |||||||| || | | ||||| || ||||
Sbjct 19252 TGACGCATCCATCGACCAGATCACGAAGAACCAGGAAATCCAGAACATCAAGCAGTTCCT 19193
Query 13786 TGGTCTTCA--ACAAGGAAAAGACTACCAAGATGTTTCTGAA----CTTCGCTATGGTCG 13839
||||| | ||||| | | |||| |||| ||| || ||||||||||
Sbjct 19192 CGGTCTGAAGCACAAGCAGAC--CTACACAGATAC----GAAGAGTCTACGCTATGGTCA 19139
Query 13840 TCTTATGATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCT 13890
||| ||||| ||| | ||| ||| | || ||||||||||||||||||||
Sbjct 19138 TCTGATGATCATGGCCGATCAGGATCACGACGGTTCTCACATCAAGGGTCT 19088
>seq3337
Length=46210
Score = 89.7 bits (98), Expect = 6e-13
Identities = 343/533 (64%), Gaps = 27/533 (5%)
Strand=Plus/Minus
Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT--- 65052
|||||| || || || || ||| |||||||| | ||||| | || ||| ||
Sbjct 4617 GCCATC---ACAGTCCCTTGCATTCGCAAGAAGGCCGACTGGGCCCTCAAGTGGATTAGC 4561
Query 65053 GACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATC 65112
|| ||||| |||||||||| ||||||| |||| ||||| || ||||| |||
Sbjct 4560 GATGAGAAGTC---CTCCTTCGCCCAGCGCCTGGTTGCCTTTGCTGCCGTCGAGGGCATC 4504
Query 65113 TTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGC 65172
||||| || | ||| | || | ||| | |||||||| ||||||||||| ||
Sbjct 4503 TTCTTTAGTGGTGCCTTCGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCGGGT 4444
Query 65173 CTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTG 65232
|| |||||| || || || || || || || |||||||| ||| || || ||| ||
Sbjct 4443 CTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCC-TG 4385
Query 65233 GAGCTCTTCAAGACTTTGCGTAATA---GACCCACTACCGAAACTATCCACGCCATCGTG 65289
||||| | | | || | | |||| | | |||| | | |||| |
Sbjct 4384 --TCTCTTGTATTCCCACCTCAAGAACCGCCCCAGCAAGCAGGTTATCGAGGACATCATT 4327
Query 65290 AAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATC 65349
|| || || |||||||| | | |||| | ||| || || || || || ||
Sbjct 4326 GTCGATGCTGTCAAGATTGAGCAGGAGTTCCTGACGGAGGCTCTTCCTTGCGCCCTGCTC 4267
Query 65350 GGTATGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAA 65409
|| |||||||| | |||| |||||||||||| || | || ||||||||
Sbjct 4266 GGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTTCGTTGCCGACCGTCTCCT---- 4211
Query 65410 CAAGTTG-GGGTGCCACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAA 65463
|||| | || || | | | | || | || || || ||||| |||||
Sbjct 4210 --TGTTGCGCTTGGCAACGAAAAGGTCTACAAGTCTTCCAACCCCTTCGACTTCATGGAG 4153
Query 65464 AACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
||||| ||| | || |||||||||||||| |||||||| |||| |||||
Sbjct 4152 AACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTA 4100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596537101871040
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