Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq4036 131 1e-25
>seq4036
Length=33180
Score = 131 bits (144), Expect = 1e-25
Identities = 221/317 (70%), Gaps = 6/317 (2%)
Strand=Plus/Minus
Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377
|| ||||| ||||| | || | | || | || |||||| |||||| || || ||
Sbjct 20157 TCGGTCTCGGGGTTCTTGCACTTCTTGCAGAGGACGAACTTGTTGATGAAGCCGTCGAGG 20098
Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437
||||||| | ||| ||| || |||||||||||||| ||| | || |||| |
Sbjct 20097 TGGTCCTGCAGCTTGGCGGCGTTGTGGGAGCCGTTGATGATCCAGCGGTCGTCGGCGGGG 20038
Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTT--TGTCGGGTAAATGGCCG 34495
||||| | || || || || |||||| | ||||||||||| || || || ||||
Sbjct 20037 TCGACGTTGGTCTGGGCACCGAGCTCGAAGCCGAAGTACTTGATGACG---AAGGCGCCG 19981
Query 34496 G-ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTG 34554
| ||| |||| | || |||| | || |||||||| || ||||||||||| |||
Sbjct 19980 GGACGGGCAAGAGACTGAGCGACGCTGCTCAGGTTGACGACAACGGTCTTGATGCCATTG 19921
Query 34555 CCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614
||||| || |||| ||||| | ||| | ||| |||||||| ||||| ||||||
Sbjct 19920 CCCTTGCCCTCGATCTTGGTGACGATCTTCTCCATCTTGTAGCGATAGAAAGCGTCCTTG 19861
Query 34615 ACATTGCGGTTAACGTT 34631
|| | |||| ||||||
Sbjct 19860 ACGTCGCGGCGAACGTT 19844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412819672692494
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |