Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4036 131 1e-25 >seq4036 Length=33180 Score = 131 bits (144), Expect = 1e-25 Identities = 221/317 (70%), Gaps = 6/317 (2%) Strand=Plus/Minus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | || | | || | || |||||| |||||| || || || Sbjct 20157 TCGGTCTCGGGGTTCTTGCACTTCTTGCAGAGGACGAACTTGTTGATGAAGCCGTCGAGG 20098 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 ||||||| | ||| ||| || |||||||||||||| ||| | || |||| | Sbjct 20097 TGGTCCTGCAGCTTGGCGGCGTTGTGGGAGCCGTTGATGATCCAGCGGTCGTCGGCGGGG 20038 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTT--TGTCGGGTAAATGGCCG 34495 ||||| | || || || || |||||| | ||||||||||| || || || |||| Sbjct 20037 TCGACGTTGGTCTGGGCACCGAGCTCGAAGCCGAAGTACTTGATGACG---AAGGCGCCG 19981 Query 34496 G-ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTG 34554 | ||| |||| | || |||| | || |||||||| || ||||||||||| ||| Sbjct 19980 GGACGGGCAAGAGACTGAGCGACGCTGCTCAGGTTGACGACAACGGTCTTGATGCCATTG 19921 Query 34555 CCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614 ||||| || |||| ||||| | ||| | ||| |||||||| ||||| |||||| Sbjct 19920 CCCTTGCCCTCGATCTTGGTGACGATCTTCTCCATCTTGTAGCGATAGAAAGCGTCCTTG 19861 Query 34615 ACATTGCGGTTAACGTT 34631 || | |||| |||||| Sbjct 19860 ACGTCGCGGCGAACGTT 19844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412819672692494