Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq3878 84.2 2e-11
>seq3878
Length=33396
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| || || || || |||||||||||||||| |||| ||| || ||||| || |||
Sbjct 29558 GTCGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTCCTCCAGTTGCTTTCCA 29499
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
|| | ||||| || ||||| || || || || || || ||||| ||||| ||
Sbjct 29498 GCGAAAATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTTGGATTTTGGACTTG 29439
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | ||||| | | || || || | || | |||||| |||||||| ||
Sbjct 29438 ACGTTGTCGATAGTGTCAGAAGACTCAACCTCCAACGTAATCGTCTTTCCGGTCAAGGTC 29379
Query 137395 TTTACGAATATTTGCATAGCT 137415
|| || || ||||||||| ||
Sbjct 29378 TTGACAAAGATTTGCATACCT 29358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488517386565600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |