Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq245 102 8e-17
>seq245
Length=98725
Score = 102 bits (112), Expect = 8e-17
Identities = 958/1542 (62%), Gaps = 53/1542 (3%)
Strand=Plus/Minus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952
||||| ||||| |||||||| || || ||||| | | || | ||| ||| ||||
Sbjct 90700 TTGACGACTTGGAACTCGCCAGCAAGGACACGACGCTGGTAAATGTTGGAGGTGTAAGGT 90641
Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012
|| || |||| || || || || || || | ||| | || || |||||| ||| ||
Sbjct 90640 TCGAAGCACTCGTTGTTACCCAAGATCTGAGAGGTGCTGGCAGTCGGCATGGGCGCGACG 90581
Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072
| || || || || | ||||| | ||| | ||||||| || | |||||||||
Sbjct 90580 AGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGCTCCTTCAGAGAATCCCAGTCCCAG 90521
Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTG 147132
| |||||| | || |||||||||||||||||||| | || || | ||
Sbjct 90520 AGATCCGAGGGTTTGACATTCCACATGTCGTACTGGAGGATGCCCTGAGAAACAGGGGAA 90461
Query 147133 CCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCA--CAGCTTGCCTCGAGCG 147190
|| | |||| ||| || || || ||||| | | | | || || |
Sbjct 90460 CCCTCATACGTCTGATAGGGGCCCTCCTCCTTGGCCAACTGAACCGACATG--GTAAGGG 90403
Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGT 147250
| | | ||| || || ||| ||| | ||||| ||| | ||||| | ||||
Sbjct 90402 CAGCGTGGTAGATTGTCTCGAAGATCTTCTTGTTGAGGTCACGAGCTTCGGGGGACTCGA 90343
Query 147251 AAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTC 147310
| ||||| || || || ||||||||||| | |||||| | ||||| || || || |
Sbjct 90342 AGGGCATGCGGAGGGCCAAGAAGGCATCGGCAAGACCCTGAACACCGAGACCAATGGGGC 90283
Query 147311 GATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAATAAT 147368
| || |||||| | | || || || | || ||||||||| ||| || ||
Sbjct 90282 GGTGGCGCATGTTGCT--GTTGCGAGCCTCCTGGACCGGGTAGTGGTTGACATCGATGAT 90225
Query 147369 CTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGT 147428
|||||||||| || || || || | || | | || |||| ||| || |||
Sbjct 90224 TCTGTTGAGGTTGCGAACGACGACCTGGGTGACCTCGTGAAGCTTCTGGAAGTCGTAAAC 90165
Query 147429 CCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGT 147488
|| || | | ||| | | || || | || ||||| ||||| || ||
Sbjct 90164 ACCCTCGTTGTAGTCAACGAAGGTGGGCAGCGCAAGCGAGGCCAGGTTGCACACTGCGAC 90105
Query 147489 CTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCC 147548
||| || | ||| ||||| | ||| || | ||| |||||| | ||| ||
Sbjct 90104 CTCATCAGGAGCGCAGTACTCAATGATCTCAGTGCATAGGTTGGAGTTACGGATGGTACC 90045
Query 147549 CAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCC 147608
|| || | ||| ||||| || || ||| || || ||| ||||||| | || ||
Sbjct 90044 CAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATAAAGGGGTTACC 89985
Query 147609 GGTCTCGACTTGCGTTTCAACGAT---AAACCTATGC---AGGTCCT----GCGCTCGCA 147658
|||||| ||| | || | ||| | ||| || || ||| | || ||
Sbjct 89984 AGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTTTGGGCCTTTAGGGTCTTGCG 89925
Query 147659 CCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGC 147718
|| |||| || | || |||||| |||||||| ||| || || ||||
Sbjct 89924 ACCTTTGCCCAT--CTGC--------TCGTACTTCTCGTACAGGGCCTCGAATTCCTCGC 89875
Query 147719 CGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCG 147778
||||||| ||||| || || || |||| | || ||||| || | ||| | ||| |
Sbjct 89874 CGTAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCT 89815
Query 147779 CGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTT 147838
| || | ||| || ||||| || | ||| || ||| | || || || ||
Sbjct 89814 TCTCCACTCTCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGAAATAGGTCACGAGCGC 89755
Query 147839 TGCAATCCTCGGCGCCCATG----TTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCG 147894
| ||||| |||||| ||||| || || | | | | | | || |||
Sbjct 89754 GGACCTCCTC-CTTCCCATGGTTCTTGCG---CAGATCCAAGAAGTCAAATACATCAGCG 89699
Query 147895 TGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACA 147951
||||| || || | ||||| ||| | ||||| ||| |||||||||||||||||
Sbjct 89698 TGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTTCCGCCCTGGTCGACG 89639
Query 147952 TGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTG 148011
| ||| | ||||||| || || || | |||||| | | |||| | | |||||||||
Sbjct 89638 TAGCGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGACGCCGTTAGAGGTGCCGTTG 89579
Query 148012 GTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC- 148070
||| | || | |||| || || | ||| ||||| | |||||||| ||
Sbjct 89578 GTGCCAGCAATGTAAGAGCCGGTAGCGCGGATGCGGTGGACGTTGAGACCAATGCCACCA 89519
Query 148071 GCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTC 148130
||| | ||| || || ||| || | || |||||| || ||||| |||
Sbjct 89518 GCCAT-CTTGGAGATCATAGCACAGGTCTTGAGGGTGTCGTAGATACCCTCGATAGAGTC 89460
Query 148131 GTTTTTGA---CGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGA 148187
| || | || |||| ||||| || ||| |||| | || || ||
Sbjct 89459 CTCCTTCATATCGACAAG---GAAACAAGAGGACAGCTGCGCCTGGGGGGTACCGGCGTT 89403
Query 148188 GAAAAGGGTGGGACTCGCGTGCGTAAACAATTT--TTGACTCATCATGCGATACGTCTCA 148245
||| || |||||| ||||| || || || || | || ||||| | || |||||
Sbjct 89402 GAAGAGTGTGGGAGAGGCGTGGGTGAAGAACTTGCTCGA--CATCAGGTTGTAGGTCTCG 89345
Query 148246 ATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGT 148305
||| || || | || |||||| || || | || || ||||||| |||||||||
Sbjct 89344 ATAACGCGCTCAACGTTGTCGCCCCAGATTCCGACAGCAACACGCATGATCATGTGCTGG 89285
Query 148306 GGTCGTTCGGCAA-CTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTA 148364
|||| ||||||| |||| || | ||| || || || | || | ||| ||| |
Sbjct 89284 GGTCTCTCGGCAATCTTG-CCGTCAAGCTTCAGGAGGTAAGATCTCTCCAAGGTCTTGAA 89226
Query 148365 ACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406
|| ||||| | ||| | || || | ||||| |||||||
Sbjct 89225 GCCGAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACGATGGC 89184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476585236604880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |