Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq855 127 2e-24
>seq855
Length=37984
Score = 127 bits (140), Expect = 2e-24
Identities = 347/533 (65%), Gaps = 50/533 (9%)
Strand=Plus/Plus
Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965
||| ||| | || |||| || ||||||| | ||||||||| || || |||| | ||
Sbjct 2115 CCAACTGCACCTTGAGGGCATCAACGTGGTCGGCGTAGACGTGGGCATCGCCCATGACGT 2174
Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTG--GGCCACCATGTAGGTGAGCAGCGA 147023
|| | | || ||| ||| || || ||| ||| | ||||| || |||||||
Sbjct 2175 GCGTCAGGCTGCCGGGCACGAGGTCG--CATGTGCGGGCAATCATGTGCGTCAGCAGCGC 2232
Query 147024 GTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTG 147083
|||||| || |||||||| || || || ||||||||||| | |||| ||||||||||||
Sbjct 2233 GTAGCTCGCGATGTTGAAAGGTACTCCGAGGCCCATGTCGCAGGACCGCTGGTACAGCTG 2292
Query 147084 -----GCACGAGA----------GCTCCCCGTCGGC------------------------ 147104
||| | || |||||| |||||
Sbjct 2293 GCAGTGCAGGTGACCCTTGGGCTTCTCCCCTTCGGCGGGTGCGCCGCGCCCCCGCGGGTA 2352
Query 147105 ---CACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCG 147160
||||| ||||| ||| | |||||||| || ||||| ||||| || ||||
Sbjct 2353 GGAGACGTAGAACTGCGCA-AACATGTGGCATGGTGGCAGGGCCATCTTCTTTAGATCCG 2411
Query 147161 CGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCG 147219
| |||||||| || || | | || | | || | |||||| |||| | || | |
Sbjct 2412 CCGGGTTCCACGCGCTGAGGAGGATGCGGC-GATCGTAAGGGTTCGTCTTGAGCTTGTGG 2470
Query 147220 ATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTAC 147279
|||||| |||||||| || ||||| ||| ||||| ||| | ||| ||||||
Sbjct 2471 ATAACCTCGGCAAGCTGGTCGACACCCTGACCCGTGTAGTCCGTCTTGGCGTCGACGTAC 2530
Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTG 147339
||| |||||||| | ||| ||||| || || ||||| || ||||||||| | || |
Sbjct 2531 TCGGCGCCAAAGTGTCGCCATTGGAATCCATAGACTGGGCCGAGGTCGCCGACTTCTCGG 2590
Query 147340 TGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392
||||||| ||| | | | || ||||| | || |||| | ||||||| ||
Sbjct 2591 TGCGAGAGGCCGACACTGTCCAGGAACTCACGTGAGCCGTTGCCGTCCCAAAT 2643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583456214491200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |